Literature DB >> 11375928

The renaissance of aminoacyl-tRNA synthesis.

M Ibba1, D Söll.   

Abstract

The role of tRNA as the adaptor in protein synthesis has held an enduring fascination for molecular biologists. Over four decades of study, taking in numerous milestones in molecular biology, led to what was widely held to be a fairly complete picture of how tRNAs and amino acids are paired prior to protein synthesis. However, recent developments in genomics and structural biology have revealed an unexpected array of new enzymes, pathways and mechanisms involved in aminoacyl-tRNA synthesis. As a more complete picture of aminoacyl-tRNA synthesis now begins to emerge, the high degree of evolutionary diversity in this universal and essential process is becoming clearer.

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Year:  2001        PMID: 11375928      PMCID: PMC1083889          DOI: 10.1093/embo-reports/kve095

Source DB:  PubMed          Journal:  EMBO Rep        ISSN: 1469-221X            Impact factor:   8.807


  60 in total

1.  Active aminoacyl-tRNA synthetases are present in nuclei as a high molecular weight multienzyme complex.

Authors:  L Nathanson; M P Deutscher
Journal:  J Biol Chem       Date:  2000-10-13       Impact factor: 5.157

2.  Crystal structure of a eukaryote/archaeon-like protyl-tRNA synthetase and its complex with tRNAPro(CGG).

Authors:  A Yaremchuk; S Cusack; M Tukalo
Journal:  EMBO J       Date:  2000-09-01       Impact factor: 11.598

3.  Domain-specific recruitment of amide amino acids for protein synthesis.

Authors:  D L Tumbula; H D Becker; W Z Chang; D Söll
Journal:  Nature       Date:  2000-09-07       Impact factor: 49.962

4.  Global transposon mutagenesis and a minimal Mycoplasma genome.

Authors:  C A Hutchison; S N Peterson; S R Gill; R T Cline; O White; C M Fraser; H O Smith; J C Venter
Journal:  Science       Date:  1999-12-10       Impact factor: 47.728

5.  Crystal structure of trbp111: a structure-specific tRNA-binding protein.

Authors:  M A Swairjo; A J Morales; C C Wang; A R Ortiz; P Schimmel
Journal:  EMBO J       Date:  2000-12-01       Impact factor: 11.598

6.  A tiny RNA that catalyzes both aminoacyl-RNA and peptidyl-RNA synthesis.

Authors:  M Illangasekare; M Yarus
Journal:  RNA       Date:  1999-11       Impact factor: 4.942

7.  Structural basis for double-sieve discrimination of L-valine from L-isoleucine and L-threonine by the complex of tRNA(Val) and valyl-tRNA synthetase.

Authors:  S Fukai; O Nureki; S Sekine; A Shimada; J Tao; D G Vassylyev; S Yokoyama
Journal:  Cell       Date:  2000-11-22       Impact factor: 41.582

8.  Heat shock protein 90 mediates protein-protein interactions between human aminoacyl-tRNA synthetases.

Authors:  J Kang; T Kim; Y G Ko; S B Rho; S G Park; M J Kim; H J Kwon; S Kim
Journal:  J Biol Chem       Date:  2000-10-13       Impact factor: 5.157

9.  A dual-specificity aminoacyl-tRNA synthetase in the deep-rooted eukaryote Giardia lamblia.

Authors:  S Bunjun; C Stathopoulos; D Graham; B Min; M Kitabatake; A L Wang; C C Wang; C P Vivarès; L M Weiss; D Söll
Journal:  Proc Natl Acad Sci U S A       Date:  2000-11-21       Impact factor: 11.205

10.  Glutamyl-tRNA(Gln) amidotransferase in Deinococcus radiodurans may be confined to asparagine biosynthesis.

Authors:  A W Curnow; D L Tumbula; J T Pelaschier; B Min; D Söll
Journal:  Proc Natl Acad Sci U S A       Date:  1998-10-27       Impact factor: 11.205

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  26 in total

1.  On the evolution of primitive genetic codes.

Authors:  Günter Weberndorfer; Ivo L Hofacker; Peter F Stadler
Journal:  Orig Life Evol Biosph       Date:  2003-10       Impact factor: 1.950

2.  tRNA synthetase paralogs: evolutionary links in the transition from tRNA-dependent amino acid biosynthesis to de novo biosynthesis.

Authors:  Christopher Francklyn
Journal:  Proc Natl Acad Sci U S A       Date:  2003-08-11       Impact factor: 11.205

3.  Malaria parasite tyrosyl-tRNA synthetase secretion triggers pro-inflammatory responses.

Authors:  Tarun Kumar Bhatt; Sameena Khan; Ved Prakash Dwivedi; Mudassir Meraj Banday; Arvind Sharma; Anmol Chandele; Noelia Camacho; Lluís Ribas de Pouplana; Yang Wu; Alister G Craig; Antti Tapani Mikkonen; Alexander Gerd Maier; Manickam Yogavel; Amit Sharma
Journal:  Nat Commun       Date:  2011-11-08       Impact factor: 14.919

Review 4.  Progress and challenges in aminoacyl-tRNA synthetase-based therapeutics.

Authors:  Christopher S Francklyn; Patrick Mullen
Journal:  J Biol Chem       Date:  2019-01-22       Impact factor: 5.157

Review 5.  Emergence and evolution.

Authors:  Tammy J Bullwinkle; Michael Ibba
Journal:  Top Curr Chem       Date:  2014

6.  Transcriptome and growth efficiency comparisons of recombinant thermophiles that produce thermolabile and thermostable proteins: implications for burden-based selection of thermostable proteins.

Authors:  Hirokazu Suzuki; Yuta Okumura; Yui Mikawa; Mao Takata; Shunsuke Yoshimura; Takashi Ohshiro
Journal:  Extremophiles       Date:  2021-06-30       Impact factor: 2.395

7.  One ancestor for two codes viewed from the perspective of two complementary modes of tRNA aminoacylation.

Authors:  Andrei S Rodin; Eörs Szathmáry; Sergei N Rodin
Journal:  Biol Direct       Date:  2009-01-27       Impact factor: 4.540

8.  A yeast arginine specific tRNA is a remnant aspartate acceptor.

Authors:  Aurélie Fender; Renaud Geslain; Gilbert Eriani; Richard Giegé; Marie Sissler; Catherine Florentz
Journal:  Nucleic Acids Res       Date:  2004-09-27       Impact factor: 16.971

9.  Detection of lateral gene transfer events in the prokaryotic tRNA synthetases by the ratios of evolutionary distances method.

Authors:  Kamyar Farahi; Gordon D Pusch; Ross Overbeek; William B Whitman
Journal:  J Mol Evol       Date:  2004-05       Impact factor: 2.395

10.  A genomic glimpse of aminoacyl-tRNA synthetases in malaria parasite Plasmodium falciparum.

Authors:  Tarun Kumar Bhatt; Charu Kapil; Sameena Khan; Mohamad Aman Jairajpuri; Vinay Sharma; Daniele Santoni; Francesco Silvestrini; Elisabetta Pizzi; Amit Sharma
Journal:  BMC Genomics       Date:  2009-12-31       Impact factor: 3.969

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