Literature DB >> 10508104

Diversity of sulfate-reducing bacteria in oxic and anoxic regions of a microbial mat characterized by comparative analysis of dissimilatory sulfite reductase genes.

D Minz1, J L Flax, S J Green, G Muyzer, Y Cohen, M Wagner, B E Rittmann, D A Stahl.   

Abstract

Sequence analysis of genes encoding dissimilatory sulfite reductase (DSR) was used to identify sulfate-reducing bacteria in a hypersaline microbial mat and to evaluate their distribution in relation to levels of oxygen. The most highly diverse DSR sequences, most related to those of the Desulfonema-like organisms within the delta-proteobacteria, were recovered from oxic regions of the mat. This observation extends those of previous studies by us and others associating Desulfonema-like organisms with oxic habitats.

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Keywords:  Non-programmatic

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Year:  1999        PMID: 10508104      PMCID: PMC91622          DOI: 10.1128/AEM.65.10.4666-4671.1999

Source DB:  PubMed          Journal:  Appl Environ Microbiol        ISSN: 0099-2240            Impact factor:   4.792


  33 in total

1.  Diversity of heterotrophic nitrogen fixation genes in a marine cyanobacterial mat.

Authors:  J P Zehr; M Mellon; S Braun; W Litaker; T Steppe; H W Paerl
Journal:  Appl Environ Microbiol       Date:  1995-07       Impact factor: 4.792

2.  Diversity of the ribulose bisphosphate carboxylase/oxygenase form I gene (rbcL) in natural phytoplankton communities.

Authors:  S L Pichard; L Campbell; J H Paul
Journal:  Appl Environ Microbiol       Date:  1997-09       Impact factor: 4.792

3.  Towards the phylogeny of APS reductases and sirohaem sulfite reductases in sulfate-reducing and sulfur-oxidizing prokaryotes.

Authors:  W M Hipp; A S Pott; N Thum-Schmitz; I Faath; C Dahl; H G Trüper
Journal:  Microbiology (Reading)       Date:  1997-09       Impact factor: 2.777

4.  Unexpected population distribution in a microbial mat community: sulfate-reducing bacteria localized to the highly oxic chemocline in contrast to a eukaryotic preference for anoxia.

Authors:  D Minz; S Fishbain; S J Green; G Muyzer; Y Cohen; B E Rittmann; D A Stahl
Journal:  Appl Environ Microbiol       Date:  1999-10       Impact factor: 4.792

5.  Amplification of the amoA gene from diverse species of ammonium-oxidizing bacteria and from an indigenous bacterial population from seawater.

Authors:  C D Sinigalliano; D N Kuhn; R D Jones
Journal:  Appl Environ Microbiol       Date:  1995-07       Impact factor: 4.792

6.  Community structure of a microbial mat: the phylogenetic dimension.

Authors:  J B Risatti; W C Capman; D A Stahl
Journal:  Proc Natl Acad Sci U S A       Date:  1994-10-11       Impact factor: 11.205

7.  Diversity of dissimilatory bisulfite reductase genes of bacteria associated with the deep-sea hydrothermal vent polychaete annelid Alvinella pompejana.

Authors:  M T Cottrell; S C Cary
Journal:  Appl Environ Microbiol       Date:  1999-03       Impact factor: 4.792

8.  Problems and Promises of Assaying the Genetic Potential for Nitrogen Fixation in the Marine Environment

Authors: 
Journal:  Microb Ecol       Date:  1996-11       Impact factor: 4.552

9.  Conservation of the genes for dissimilatory sulfite reductase from Desulfovibrio vulgaris and Archaeoglobus fulgidus allows their detection by PCR.

Authors:  R R Karkhoff-Schweizer; D P Huber; G Voordouw
Journal:  Appl Environ Microbiol       Date:  1995-01       Impact factor: 4.792

10.  Use of phylogenetically based hybridization probes for studies of ruminal microbial ecology.

Authors:  D A Stahl; B Flesher; H R Mansfield; L Montgomery
Journal:  Appl Environ Microbiol       Date:  1988-05       Impact factor: 4.792

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  57 in total

1.  Congruent phylogenies of most common small-subunit rRNA and dissimilatory sulfite reductase gene sequences retrieved from estuarine sediments.

Authors:  C Joulian; N B Ramsing; K Ingvorsen
Journal:  Appl Environ Microbiol       Date:  2001-07       Impact factor: 4.792

2.  Multiple lateral transfers of dissimilatory sulfite reductase genes between major lineages of sulfate-reducing prokaryotes.

Authors:  M Klein; M Friedrich; A J Roger; P Hugenholtz; S Fishbain; H Abicht; L L Blackall; D A Stahl; M Wagner
Journal:  J Bacteriol       Date:  2001-10       Impact factor: 3.490

3.  Molecular characterization of community structures and sulfur metabolism within microbial streamers in Japanese hot springs.

Authors:  Tatsunori Nakagawa; Manabu Fukui
Journal:  Appl Environ Microbiol       Date:  2003-12       Impact factor: 4.792

4.  Linkage of high rates of sulfate reduction in Yellowstone hot springs to unique sequence types in the dissimilatory sulfate respiration pathway.

Authors:  Susan Fishbain; Jesse G Dillon; Heidi L Gough; David A Stahl
Journal:  Appl Environ Microbiol       Date:  2003-06       Impact factor: 4.792

5.  Analysis of dissimilatory sulfite reductase and 16S rRNA gene fragments from deep-sea hydrothermal sites of the Suiyo Seamount, Izu-Bonin Arc, Western Pacific.

Authors:  Tatsunori Nakagawa; Jun-Ichiro Ishibashi; Akihiko Maruyama; Toshiro Yamanaka; Yusuke Morimoto; Hiroyuki Kimura; Tetsuro Urabe; Manabu Fukui
Journal:  Appl Environ Microbiol       Date:  2004-01       Impact factor: 4.792

6.  Microbial mats on the Orkney Islands revisited: microenvironment and microbial community composition.

Authors:  A Wieland; M Kühl; L McGowan; A Fourçans; R Duran; P Caumette; T García de Oteyza; J O Grimalt; A Solé; E Diestra; I Esteve; R A Herbert
Journal:  Microb Ecol       Date:  2003-08-14       Impact factor: 4.552

7.  Molecular diversity of sulfate-reducing bacteria from two different continental margin habitats.

Authors:  Xueduan Liu; Christopher E Bagwell; Liyou Wu; Allan H Devol; Jizhong Zhou
Journal:  Appl Environ Microbiol       Date:  2003-10       Impact factor: 4.792

8.  Novel forms of structural integration between microbes and a hydrothermal vent gastropod from the Indian Ocean.

Authors:  Shana K Goffredi; Anders Warén; Victoria J Orphan; Cindy L Van Dover; Robert C Vrijenhoek
Journal:  Appl Environ Microbiol       Date:  2004-05       Impact factor: 4.792

9.  Improved dsrA-based terminal restriction fragment length polymorphism analysis of sulfate-reducing bacteria.

Authors:  Daniel Santillano; Antje Boetius; Alban Ramette
Journal:  Appl Environ Microbiol       Date:  2010-06-11       Impact factor: 4.792

10.  Molecular characterization of sulfate-reducing bacteria in the Guaymas Basin.

Authors:  Ashita Dhillon; Andreas Teske; Jesse Dillon; David A Stahl; Mitchell L Sogin
Journal:  Appl Environ Microbiol       Date:  2003-05       Impact factor: 4.792

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