Literature DB >> 12788778

Linkage of high rates of sulfate reduction in Yellowstone hot springs to unique sequence types in the dissimilatory sulfate respiration pathway.

Susan Fishbain1, Jesse G Dillon, Heidi L Gough, David A Stahl.   

Abstract

Diversity, habitat range, and activities of sulfate-reducing prokaryotes within hot springs in Yellowstone National Park were characterized using endogenous activity measurements, molecular characterization, and enrichment. Five major phylogenetic groups were identified using PCR amplification of the dissimilatory sulfite reductase genes (dsrAB) from springs demonstrating significant sulfate reduction rates, including a warm, acidic (pH 2.5) stream and several nearly neutral hot springs with temperatures reaching 89 degrees C. Three of these sequence groups were unrelated to named lineages, suggesting that the diversity and habitat range of sulfate-reducing prokaryotes exceeds that now represented in culture.

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Keywords:  Non-programmatic

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Year:  2003        PMID: 12788778      PMCID: PMC161500          DOI: 10.1128/AEM.69.6.3663-3667.2003

Source DB:  PubMed          Journal:  Appl Environ Microbiol        ISSN: 0099-2240            Impact factor:   4.792


  21 in total

1.  Diversity of sulfate-reducing bacteria in oxic and anoxic regions of a microbial mat characterized by comparative analysis of dissimilatory sulfite reductase genes.

Authors:  D Minz; J L Flax; S J Green; G Muyzer; Y Cohen; M Wagner; B E Rittmann; D A Stahl
Journal:  Appl Environ Microbiol       Date:  1999-10       Impact factor: 4.792

2.  Multiple lateral transfers of dissimilatory sulfite reductase genes between major lineages of sulfate-reducing prokaryotes.

Authors:  M Klein; M Friedrich; A J Roger; P Hugenholtz; S Fishbain; H Abicht; L L Blackall; D A Stahl; M Wagner
Journal:  J Bacteriol       Date:  2001-10       Impact factor: 3.490

3.  Characterization of a new thermophilic sulfate-reducing bacterium Thermodesulfovibrio yellowstonii, gen. nov. and sp. nov.: its phylogenetic relationship to Thermodesulfobacterium commune and their origins deep within the bacterial domain.

Authors:  E A Henry; R Devereux; J S Maki; C C Gilmour; C R Woese; L Mandelco; R Schauder; C C Remsen; R Mitchell
Journal:  Arch Microbiol       Date:  1994-01       Impact factor: 2.552

4.  Isolation of extremely thermophilic sulfate reducers: evidence for a novel branch of archaebacteria.

Authors:  K O Stetter; G Lauerer; M Thomm; A Neuner
Journal:  Science       Date:  1987-05-15       Impact factor: 47.728

5.  Diffusion of the Interspecies Electron Carriers H(2) and Formate in Methanogenic Ecosystems and Its Implications in the Measurement of K(m) for H(2) or Formate Uptake.

Authors:  D R Boone; R L Johnson; Y Liu
Journal:  Appl Environ Microbiol       Date:  1989-07       Impact factor: 4.792

6.  Population structure of microbial communities associated with two deep, anaerobic, alkaline aquifers.

Authors:  N K Fry; J K Fredrickson; S Fishbain; M Wagner; D A Stahl
Journal:  Appl Environ Microbiol       Date:  1997-04       Impact factor: 4.792

7.  Natural relationships among sulfate-reducing eubacteria.

Authors:  R Devereux; M Delaney; F Widdel; D A Stahl
Journal:  J Bacteriol       Date:  1989-12       Impact factor: 3.490

8.  Diversity and characterization of sulfate-reducing bacteria in groundwater at a uranium mill tailings site.

Authors:  Y J Chang; A D Peacock; P E Long; J R Stephen; J P McKinley; S J Macnaughton; A K Hussain; A M Saxton; D C White
Journal:  Appl Environ Microbiol       Date:  2001-07       Impact factor: 4.792

9.  Sulfate Reduction at a Lignite Seam: Microbial Abundance and Activity.

Authors:  J. Detmers; U. Schulte; H. Strauss; J. Kuever
Journal:  Microb Ecol       Date:  2001-10       Impact factor: 4.552

10.  Diversity of dissimilatory bisulfite reductase genes of bacteria associated with the deep-sea hydrothermal vent polychaete annelid Alvinella pompejana.

Authors:  M T Cottrell; S C Cary
Journal:  Appl Environ Microbiol       Date:  1999-03       Impact factor: 4.792

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  20 in total

1.  Molecular characterization of community structures and sulfur metabolism within microbial streamers in Japanese hot springs.

Authors:  Tatsunori Nakagawa; Manabu Fukui
Journal:  Appl Environ Microbiol       Date:  2003-12       Impact factor: 4.792

2.  Analysis of dissimilatory sulfite reductase and 16S rRNA gene fragments from deep-sea hydrothermal sites of the Suiyo Seamount, Izu-Bonin Arc, Western Pacific.

Authors:  Tatsunori Nakagawa; Jun-Ichiro Ishibashi; Akihiko Maruyama; Toshiro Yamanaka; Yusuke Morimoto; Hiroyuki Kimura; Tetsuro Urabe; Manabu Fukui
Journal:  Appl Environ Microbiol       Date:  2004-01       Impact factor: 4.792

3.  Effects of trace element concentrations on culturing thermophiles.

Authors:  D R Meyer-Dombard; E L Shock; J P Amend
Journal:  Extremophiles       Date:  2012-02-04       Impact factor: 2.395

4.  Coupling of functional gene diversity and geochemical data from environmental samples.

Authors:  A V Palumbo; J C Schryver; M W Fields; C E Bagwell; J-Z Zhou; T Yan; X Liu; C C Brandt
Journal:  Appl Environ Microbiol       Date:  2004-11       Impact factor: 4.792

5.  Lateral gene transfer of dissimilatory (bi)sulfite reductase revisited.

Authors:  Vladimir Zverlov; Michael Klein; Sebastian Lücker; Michael W Friedrich; Josef Kellermann; David A Stahl; Alexander Loy; Michael Wagner
Journal:  J Bacteriol       Date:  2005-03       Impact factor: 3.490

6.  Algal species and light microenvironment in a low-pH, geothermal microbial mat community.

Authors:  M J Ferris; K B Sheehan; M Kühl; K Cooksey; B Wigglesworth-Cooksey; R Harvey; J M Henson
Journal:  Appl Environ Microbiol       Date:  2005-11       Impact factor: 4.792

7.  Phylogeography of sulfate-reducing bacteria among disturbed sediments, disclosed by analysis of the dissimilatory sulfite reductase genes (dsrAB).

Authors:  J R Pérez-Jiménez; L J Kerkhof
Journal:  Appl Environ Microbiol       Date:  2005-02       Impact factor: 4.792

8.  High rates of sulfate reduction in a low-sulfate hot spring microbial mat are driven by a low level of diversity of sulfate-respiring microorganisms.

Authors:  Jesse G Dillon; Susan Fishbain; Scott R Miller; Brad M Bebout; Kirsten S Habicht; Samuel M Webb; David A Stahl
Journal:  Appl Environ Microbiol       Date:  2007-06-15       Impact factor: 4.792

9.  Molecular analysis of the diversity of sulfate-reducing and sulfur-oxidizing prokaryotes in the environment, using aprA as functional marker gene.

Authors:  Birte Meyer; Jan Kuever
Journal:  Appl Environ Microbiol       Date:  2007-10-05       Impact factor: 4.792

10.  Characterization of Microaerobacter geothermalis gen. nov., sp. nov., a novel microaerophilic, nitrate- and nitrite-reducing thermophilic bacterium isolated from a terrestrial hot spring in Tunisia.

Authors:  Nadia Khelifi; Emna Ben Romdhane; Abdeljabbar Hedi; Anne Postec; Marie-Laure Fardeau; Moktar Hamdi; Jean-Luc Tholozan; Bernard Ollivier; Agnès Hirschler-Réa
Journal:  Extremophiles       Date:  2010-04-01       Impact factor: 2.395

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