Literature DB >> 10082381

A superfamily of metalloenzymes unifies phosphopentomutase and cofactor-independent phosphoglycerate mutase with alkaline phosphatases and sulfatases.

M Y Galperin1, A Bairoch, E V Koonin.   

Abstract

Sequence analysis of the probable archaeal phosphoglycerate mutase resulted in the identification of a superfamily of metalloenzymes with similar metal-binding sites and predicted conserved structural fold. This superfamily unites alkaline phosphatase, N-acetylgalactosamine-4-sulfatase, and cerebroside sulfatase, enzymes with known three-dimensional structures, with phosphopentomutase, 2,3-bisphosphoglycerate-independent phosphoglycerate mutase, phosphoglycerol transferase, phosphonate monoesterase, streptomycin-6-phosphate phosphatase, alkaline phosphodiesterase/nucleotide pyrophosphatase PC-1, and several closely related sulfatases. In addition to the metal-binding motifs, all these enzymes contain a set of conserved amino acid residues that are likely to be required for the enzymatic activity. Mutational changes in the vicinity of these residues in several sulfatases cause mucopolysaccharidosis (Hunter, Maroteaux-Lamy, Morquio, and Sanfilippo syndromes) and metachromatic leucodystrophy.

Entities:  

Mesh:

Substances:

Year:  1998        PMID: 10082381      PMCID: PMC2144072          DOI: 10.1002/pro.5560070819

Source DB:  PubMed          Journal:  Protein Sci        ISSN: 0961-8368            Impact factor:   6.725


  48 in total

1.  Comparison of archaeal and bacterial genomes: computer analysis of protein sequences predicts novel functions and suggests a chimeric origin for the archaea.

Authors:  E V Koonin; A R Mushegian; M Y Galperin; D R Walker
Journal:  Mol Microbiol       Date:  1997-08       Impact factor: 3.501

2.  Reaction mechanism of alkaline phosphatase based on crystal structures. Two-metal ion catalysis.

Authors:  E E Kim; H W Wyckoff
Journal:  J Mol Biol       Date:  1991-03-20       Impact factor: 5.469

3.  Phosphoglycerate mutase from wheat germ: studies with isotopically labeled 3-phospho-D-glycerates showing that the catalyzed reaction is intramolecular. Appendix: phosphoglycerate mutase from wheat germ: isolation, crystallization, and properties.

Authors:  P F Leadlay; R Breathnach; J A Gatehouse; P E Johnson; J R Knowles
Journal:  Biochemistry       Date:  1977-07-12       Impact factor: 3.162

4.  Manganese(II) activation of 3-phosphoglycerate mutase of Bacillus megaterium: pH-sensitive interconversion of active and inactive forms.

Authors:  N J Kuhn; B Setlow; P Setlow
Journal:  Arch Biochem Biophys       Date:  1993-11-01       Impact factor: 4.013

5.  Phosphoglycerate mutase from wheat germ: studies with 18O-labeled substrate, investigations of the phosphatase and phosphoryl transfer activities, and evidence for a phosphoryl-enzyme intermediate.

Authors:  R Breathnach; J R Knowles
Journal:  Biochemistry       Date:  1977-07-12       Impact factor: 3.162

6.  Genetics of streptomycin production in Streptomyces griseus: nucleotide sequence of five genes, strFGHIK, including a phosphatase gene.

Authors:  K Mansouri; W Piepersberg
Journal:  Mol Gen Genet       Date:  1991-09

7.  Isolation and sequence analysis of the Pseudomonas syringae pv. tomato gene encoding a 2,3-diphosphoglycerate-independent phosphoglyceromutase.

Authors:  V L Morris; D P Jackson; M Grattan; T Ainsworth; D A Cuppels
Journal:  J Bacteriol       Date:  1995-04       Impact factor: 3.490

8.  Cooperative manganese (II) activation of 3-phosphoglycerate mutase of Bacillus megaterium: a biological pH-sensing mechanism in bacterial spore formation and germination.

Authors:  N J Kuhn; B Setlow; P Setlow; R Cammack; R Williams
Journal:  Arch Biochem Biophys       Date:  1995-06-20       Impact factor: 4.013

9.  Cloning and expression of the unique Ca2+-ATPase from Flavobacterium odoratum.

Authors:  W E Peiffer; M G Desrosiers; D R Menick
Journal:  J Biol Chem       Date:  1996-03-01       Impact factor: 5.157

10.  Histidine residues 139, 363 and 500 are essential for catalytic activity of cofactor-independent phosphoglyceromutase from developing endosperm of the castor plant.

Authors:  Y Huang; D T Dennis
Journal:  Eur J Biochem       Date:  1995-04-15
View more
  56 in total

1.  Characterization of a di-leucine-based signal in the cytoplasmic tail of the nucleotide-pyrophosphatase NPP1 that mediates basolateral targeting but not endocytosis.

Authors:  V Bello; J W Goding; V Greengrass; A Sali; V Dubljevic; C Lenoir; G Trugnan; M Maurice
Journal:  Mol Biol Cell       Date:  2001-10       Impact factor: 4.138

Review 2.  The unique features of glycolytic pathways in Archaea.

Authors:  Corné H Verhees; Servé W M Kengen; Judith E Tuininga; Gerrit J Schut; Michael W W Adams; Willem M De Vos; John Van Der Oost
Journal:  Biochem J       Date:  2003-10-15       Impact factor: 3.857

3.  Substrate-specifying determinants of the nucleotide pyrophosphatases/phosphodiesterases NPP1 and NPP2.

Authors:  Anisoara Cimpean; Cristiana Stefan; Rik Gijsbers; Willy Stalmans; Mathieu Bollen
Journal:  Biochem J       Date:  2004-07-01       Impact factor: 3.857

4.  Alkaline phosphatase mono- and diesterase reactions: comparative transition state analysis.

Authors:  Jesse G Zalatan; Daniel Herschlag
Journal:  J Am Chem Soc       Date:  2006-02-01       Impact factor: 15.419

Review 5.  A decade of research on the second messenger c-di-AMP.

Authors:  Wen Yin; Xia Cai; Hongdan Ma; Li Zhu; Yuling Zhang; Shan-Ho Chou; Michael Y Galperin; Jin He
Journal:  FEMS Microbiol Rev       Date:  2020-11-24       Impact factor: 16.408

6.  Genetic and biochemical characterization of a pathway for the degradation of 2-aminoethylphosphonate in Sinorhizobium meliloti 1021.

Authors:  Svetlana A Borisova; Harry D Christman; M E Mourey Metcalf; Nurul A Zulkepli; Jun Kai Zhang; Wilfred A van der Donk; William W Metcalf
Journal:  J Biol Chem       Date:  2011-05-04       Impact factor: 5.157

7.  An efficient, multiply promiscuous hydrolase in the alkaline phosphatase superfamily.

Authors:  Bert van Loo; Stefanie Jonas; Ann C Babtie; Alhosna Benjdia; Olivier Berteau; Marko Hyvönen; Florian Hollfelder
Journal:  Proc Natl Acad Sci U S A       Date:  2010-01-27       Impact factor: 11.205

8.  Characterization of cofactor-dependent and cofactor-independent phosphoglycerate mutases from Archaea.

Authors:  Ulrike Johnsen; Peter Schönheit
Journal:  Extremophiles       Date:  2007-06-19       Impact factor: 2.395

9.  Comparative enzymology in the alkaline phosphatase superfamily to determine the catalytic role of an active-site metal ion.

Authors:  Jesse G Zalatan; Timothy D Fenn; Daniel Herschlag
Journal:  J Mol Biol       Date:  2008-10-02       Impact factor: 5.469

10.  Genetic and functional analyses of PptA, a phospho-form transferase targeting type IV pili in Neisseria gonorrhoeae.

Authors:  Cecilia L Naessan; Wolfgang Egge-Jacobsen; Ryan W Heiniger; Matthew C Wolfgang; Finn Erik Aas; Asmund Røhr; Hanne C Winther-Larsen; Michael Koomey
Journal:  J Bacteriol       Date:  2007-10-19       Impact factor: 3.490

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.