Literature DB >> 21543322

Genetic and biochemical characterization of a pathway for the degradation of 2-aminoethylphosphonate in Sinorhizobium meliloti 1021.

Svetlana A Borisova1, Harry D Christman, M E Mourey Metcalf, Nurul A Zulkepli, Jun Kai Zhang, Wilfred A van der Donk, William W Metcalf.   

Abstract

A variety of microorganisms have the ability to use phosphonic acids as sole sources of phosphorus. Here, a novel pathway for degradation of 2-aminoethylphosphonate in the bacterium Sinorhizobium meliloti 1021 is proposed based on the analysis of the genome sequence. Gene deletion experiments confirmed the involvement of the locus containing phnW, phnA, and phnY genes in the conversion of 2-aminoethylphosphonate to inorganic phosphate. Biochemical studies of the recombinant PhnY and PhnA proteins verified their roles as phosphonoacetaldehyde dehydrogenase and phosphonoacetate hydrolase, respectively. This pathway is likely not limited to S. meliloti as suggested by the presence of homologous gene clusters in other bacterial genomes.

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Year:  2011        PMID: 21543322      PMCID: PMC3121374          DOI: 10.1074/jbc.M111.237735

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  32 in total

1.  The complete sequence of the 1,683-kb pSymB megaplasmid from the N2-fixing endosymbiont Sinorhizobium meliloti.

Authors:  T M Finan; S Weidner; K Wong; J Buhrmester; P Chain; F J Vorhölter; I Hernandez-Lucas; A Becker; A Cowie; J Gouzy; B Golding; A Pühler
Journal:  Proc Natl Acad Sci U S A       Date:  2001-07-31       Impact factor: 11.205

2.  Culture medium for enterobacteria.

Authors:  F C Neidhardt; P L Bloch; D F Smith
Journal:  J Bacteriol       Date:  1974-09       Impact factor: 3.490

3.  Nucleotide sequence and predicted functions of the entire Sinorhizobium meliloti pSymA megaplasmid.

Authors:  M J Barnett; R F Fisher; T Jones; C Komp; A P Abola; F Barloy-Hubler; L Bowser; D Capela; F Galibert; J Gouzy; M Gurjal; A Hong; L Huizar; R W Hyman; D Kahn; M L Kahn; S Kalman; D H Keating; C Palm; M C Peck; R Surzycki; D H Wells; K C Yeh; R W Davis; N A Federspiel; S R Long
Journal:  Proc Natl Acad Sci U S A       Date:  2001-07-31       Impact factor: 11.205

4.  Aldehyde dehydrogenase gene superfamily: the 2002 update.

Authors:  Nickolas A Sophos; Vasilis Vasiliou
Journal:  Chem Biol Interact       Date:  2003-02-01       Impact factor: 5.192

5.  X-ray crystallographic and site-directed mutagenesis analysis of the mechanism of Schiff-base formation in phosphonoacetaldehyde hydrolase catalysis.

Authors:  Marc C Morais; Guofeng Zhang; Wenhai Zhang; David B Olsen; Debra Dunaway-Mariano; Karen N Allen
Journal:  J Biol Chem       Date:  2003-12-10       Impact factor: 5.157

6.  Involvement of lactaldehyde dehydrogenase in several metabolic pathways of Escherichia coli K12.

Authors:  L Baldomà; J Aguilar
Journal:  J Biol Chem       Date:  1987-10-15       Impact factor: 5.157

7.  Two C-P lyase operons in Pseudomonas stutzeri and their roles in the oxidation of phosphonates, phosphite, and hypophosphite.

Authors:  Andrea K White; William W Metcalf
Journal:  J Bacteriol       Date:  2004-07       Impact factor: 3.490

8.  The purification and characterization of phosphonopyruvate hydrolase, a novel carbon-phosphorus bond cleavage enzyme from Variovorax sp Pal2.

Authors:  Anna N Kulakova; G Brian Wisdom; Leonid A Kulakov; John P Quinn
Journal:  J Biol Chem       Date:  2003-04-15       Impact factor: 5.157

9.  Studies on transformation of Escherichia coli with plasmids.

Authors:  D Hanahan
Journal:  J Mol Biol       Date:  1983-06-05       Impact factor: 5.469

10.  Genetic analysis of pigment biosynthesis in Xanthobacter autotrophicus Py2 using a new, highly efficient transposon mutagenesis system that is functional in a wide variety of bacteria.

Authors:  Rachel A Larsen; Marlena M Wilson; Adam M Guss; William W Metcalf
Journal:  Arch Microbiol       Date:  2002-06-18       Impact factor: 2.552

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  20 in total

Review 1.  Utilization of glyphosate as phosphate source: biochemistry and genetics of bacterial carbon-phosphorus lyase.

Authors:  Bjarne Hove-Jensen; David L Zechel; Bjarne Jochimsen
Journal:  Microbiol Mol Biol Rev       Date:  2014-03       Impact factor: 11.056

2.  Structural and mechanistic insights into C-P bond hydrolysis by phosphonoacetate hydrolase.

Authors:  Vinayak Agarwal; Svetlana A Borisova; William W Metcalf; Wilfred A van der Donk; Satish K Nair
Journal:  Chem Biol       Date:  2011-10-28

Review 3.  Organophosphonates revealed: new insights into the microbial metabolism of ancient molecules.

Authors:  John W McGrath; Jason P Chin; John P Quinn
Journal:  Nat Rev Microbiol       Date:  2013-04-29       Impact factor: 60.633

4.  A Putative Acetylation System in Vibrio cholerae Modulates Virulence in Arthropod Hosts.

Authors:  Kalle Liimatta; Emily Flaherty; Gabby Ro; Duy K Nguyen; Cecilia Prado; Alexandra E Purdy
Journal:  Appl Environ Microbiol       Date:  2018-10-17       Impact factor: 4.792

5.  Structure and function of phosphonoacetaldehyde dehydrogenase: the missing link in phosphonoacetate formation.

Authors:  Vinayak Agarwal; Spencer C Peck; Jui-Hui Chen; Svetlana A Borisova; Jonathan R Chekan; Wilfred A van der Donk; Satish K Nair
Journal:  Chem Biol       Date:  2013-12-19

Review 6.  Phosphonate biosynthesis and catabolism: a treasure trove of unusual enzymology.

Authors:  Spencer C Peck; Wilfred A van der Donk
Journal:  Curr Opin Chem Biol       Date:  2013-07-17       Impact factor: 8.822

7.  Phosphate insensitive aminophosphonate mineralisation within oceanic nutrient cycles.

Authors:  Jason P Chin; John P Quinn; John W McGrath
Journal:  ISME J       Date:  2018-01-16       Impact factor: 10.302

8.  Modulation of CrbS-Dependent Activation of the Acetate Switch in Vibrio cholerae.

Authors:  Itai Muzhingi; Cecilia Prado; Mariame Sylla; Frances F Diehl; Duy K Nguyen; Mariah M Servos; Stephany Flores Ramos; Alexandra E Purdy
Journal:  J Bacteriol       Date:  2018-11-06       Impact factor: 3.490

9.  The genes and enzymes of phosphonate metabolism by bacteria, and their distribution in the marine environment.

Authors:  Juan F Villarreal-Chiu; John P Quinn; John W McGrath
Journal:  Front Microbiol       Date:  2012-01-26       Impact factor: 5.640

10.  Genome sequence of Pedobacter glucosidilyticus DD6b, isolated from zooplankton Daphnia magna.

Authors:  Anja Poehlein; Rolf Daniel; Diliana D Simeonova
Journal:  Stand Genomic Sci       Date:  2015-11-11
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