Literature DB >> 9986868

Identification of contaminating fungal DNA sequences in Zymolyase.

D Rimek1, A P Garg, W H Haas, R Kappe.   

Abstract

When different preparations of Zymolyase were included in the pretreatment protocol of a panfungal PCR assay using a primer system for the 18S rRNA gene, an amplification product occurred in negative controls. The amplified fragment showed 100.0% sequence identity to the Saccharomyces sensu stricto complex and Kluyveromyces lodderae. Lyticase, lysing enzymes, and proteinase K appeared to be free from fungal DNA.

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Year:  1999        PMID： 9986868      PMCID： PMC84574     

Source DB:  PubMed          Journal:  J Clin Microbiol        ISSN： 0095-1137            Impact factor:   5.948


  17 in total

1.  Identification and elimination of DNA sequences in Taq DNA polymerase.

Authors:  M S Hughes; L A Beck; R A Skuce
Journal:  J Clin Microbiol       Date:  1994-08       Impact factor: 5.948

2.  Characterization of contaminating DNA in Taq polymerase which occurs during amplification with a primer set for Legionella 5S ribosomal RNA.

Authors:  M Maiwald; H J Ditton; H G Sonntag; M von Knebel Doeberitz
Journal:  Mol Cell Probes       Date:  1994-02       Impact factor: 2.365

3.  Methods for DNA extraction from Candida albicans.

Authors:  P M Glee; P J Russell; J A Welsch; J C Pratt; J E Cutler
Journal:  Anal Biochem       Date:  1987-07       Impact factor: 3.365

4.  Avoiding false positives with PCR.

Authors:  S Kwok; R Higuchi
Journal:  Nature       Date:  1989-05-18       Impact factor: 49.962

5.  Detection of candidemia by polymerase chain reaction.

Authors:  K H Rand; H Houck; M Wolff
Journal:  Mol Cell Probes       Date:  1994-06       Impact factor: 2.365

6.  Improved detection of Candida albicans by PCR in blood of neutropenic mice with systemic candidiasis.

Authors:  A J van Deventer; W H Goessens; A van Belkum; H J van Vliet; E W van Etten; H A Verbrugh
Journal:  J Clin Microbiol       Date:  1995-03       Impact factor: 5.948

7.  New method for detection of Candida albicans in human blood by polymerase chain reaction.

Authors:  Y Miyakawa; T Mabuchi; Y Fukazawa
Journal:  J Clin Microbiol       Date:  1993-12       Impact factor: 5.948

8.  Detection of Candida albicans and other yeasts in blood by PCR.

Authors:  A R Holmes; R D Cannon; M G Shepherd; H F Jenkinson
Journal:  J Clin Microbiol       Date:  1994-01       Impact factor: 5.948

9.  Rapid detection and identification of Candida albicans and Torulopsis (Candida) glabrata in clinical specimens by species-specific nested PCR amplification of a cytochrome P-450 lanosterol-alpha-demethylase (L1A1) gene fragment.

Authors:  P Burgener-Kairuz; J P Zuber; P Jaunin; T G Buchman; J Bille; M Rossier
Journal:  J Clin Microbiol       Date:  1994-08       Impact factor: 5.948

10.  Microtitration plate enzyme immunoassay to detect PCR-amplified DNA from Candida species in blood.

Authors:  S Fujita; B A Lasker; T J Lott; E Reiss; C J Morrison
Journal:  J Clin Microbiol       Date:  1995-04       Impact factor: 5.948
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  10 in total

Review 1.  False-positive results and contamination in nucleic acid amplification assays: suggestions for a prevent and destroy strategy.

Authors:  A Borst; A T A Box; A C Fluit
Journal:  Eur J Clin Microbiol Infect Dis       Date:  2004-03-10       Impact factor: 3.267

2.  Occurrence of Fungal DNA Contamination in PCR Reagents: Approaches to Control and Decontamination.

Authors:  S Czurda; S Smelik; S Preuner-Stix; F Nogueira; T Lion
Journal:  J Clin Microbiol       Date:  2015-11-11       Impact factor: 5.948

3.  An assessment of air as a source of DNA contamination encountered when performing PCR.

Authors:  Nina Witt; Gillian Rodger; Jo Vandesompele; Vladimir Benes; Alimuddin Zumla; Graham A Rook; Jim F Huggett
Journal:  J Biomol Tech       Date:  2009-12

4.  Advances and prospects for molecular diagnostics of fungal infections.

Authors:  Stéphane Bretagne
Journal:  Curr Infect Dis Rep       Date:  2010-11       Impact factor: 3.725

5.  Aspergillus PCR: one step closer to standardization.

Authors:  P Lewis White; Stéphane Bretagne; Lena Klingspor; Willem J G Melchers; Elaine McCulloch; Bettina Schulz; Niklas Finnstrom; Carlo Mengoli; Rosemary A Barnes; J Peter Donnelly; Juergen Loeffler
Journal:  J Clin Microbiol       Date:  2010-02-10       Impact factor: 5.948

6.  Real-time PCR coupled with automated DNA extraction and detection of galactomannan antigen in serum by enzyme-linked immunosorbent assay for diagnosis of invasive aspergillosis.

Authors:  Catherine Costa; Jean-Marc Costa; Christophe Desterke; Françoise Botterel; Catherine Cordonnier; Stéphane Bretagne
Journal:  J Clin Microbiol       Date:  2002-06       Impact factor: 5.948

7.  Detection of Paracoccidioides brasiliensis in tissue samples by a nested PCR assay.

Authors:  R Bialek; A Ibricevic; C Aepinus; L K Najvar; A W Fothergill; J Knobloch; J R Graybill
Journal:  J Clin Microbiol       Date:  2000-08       Impact factor: 5.948

Review 8.  Aspergillus Polymerase Chain Reaction: Systematic Review of Evidence for Clinical Use in Comparison With Antigen Testing.

Authors:  P Lewis White; John R Wingard; Stéphane Bretagne; Jürgen Löffler; Thomas F Patterson; Monica A Slavin; Rosemary A Barnes; Peter G Pappas; J Peter Donnelly
Journal:  Clin Infect Dis       Date:  2015-06-25       Impact factor: 9.079

9.  An Evaluation of the OLM CandID Real-Time PCR to Aid in the Diagnosis of Invasive Candidiasis When Testing Serum Samples.

Authors:  Jessica S Price; Melissa Fallon; Raquel Posso; Matthijs Backx; P Lewis White
Journal:  J Fungi (Basel)       Date:  2022-09-03

10.  Performance of optimized McRAPD in identification of 9 yeast species frequently isolated from patient samples: potential for automation.

Authors:  Jitka Trtkova; Petr Pavlicek; Lenka Ruskova; Petr Hamal; Dagmar Koukalova; Vladislav Raclavsky
Journal:  BMC Microbiol       Date:  2009-11-10       Impact factor: 3.605
  10 in total

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