Literature DB >> 9929360

Data mining by clinicians.

D J Nigrin1, I S Kohane.   

Abstract

Clinical databases are becoming commonplace in healthcare environments. However, clinicians have been unable to readily explore these information sources, because currently available data retrieval tools require substantial technical skill, as well as knowledge of the underlying database structures. To address this, we have defined a group of "atomic" queries, including both population-based and temporal predicates, to enable the extraction of clinically meaningful information form these databases. DXtractor is an application that incorporates this functionality, and allows clinicians to simply combine these atomic queries. In doing so, arbitrarily complex data retrieval and exploration becomes possible for the non-programming clinician.

Mesh:

Year:  1998        PMID: 9929360      PMCID: PMC2232327     

Source DB:  PubMed          Journal:  Proc AMIA Symp        ISSN: 1531-605X


  8 in total

1.  The Regenstrief Medical Record System: 20 years of experience in hospitals, clinics, and neighborhood health centers.

Authors:  C J McDonald; W M Tierney; J M Overhage; D K Martin; G A Wilson
Journal:  MD Comput       Date:  1992 Jul-Aug

2.  Paper chase: a computer-based reprint storage and retrieval system.

Authors:  R F Beckley; H L Bleich
Journal:  Comput Biomed Res       Date:  1977-08

3.  A comparison of the temporal expressiveness of three database query methods.

Authors:  A K Das; M A Musen
Journal:  Proc Annu Symp Comput Appl Med Care       Date:  1995

4.  ClinQuery: a system for online searching of data in a teaching hospital.

Authors:  C Safran; D Porter; J Lightfoot; C D Rury; L H Underhill; H L Bleich; W V Slack
Journal:  Ann Intern Med       Date:  1989-11-01       Impact factor: 25.391

5.  A "hot spot" in the Pit-1 gene responsible for combined pituitary hormone deficiency: clinical and molecular correlates.

Authors:  L E Cohen; F E Wondisford; A Salvatoni; M Maghnie; F Brucker-Davis; B D Weintraub; S Radovick
Journal:  J Clin Endocrinol Metab       Date:  1995-02       Impact factor: 5.958

6.  Getting the data in: three year experience with a pediatric electronic medical record system.

Authors:  I S Kohane
Journal:  Proc Annu Symp Comput Appl Med Care       Date:  1994

7.  Exploration and exploitation of clinical databases.

Authors:  C Safran; C G Chute
Journal:  Int J Biomed Comput       Date:  1995-04

8.  Topical iodine and neonatal hypothyroidism.

Authors:  C M Gordon; D H Rowitch; M L Mitchell; I S Kohane
Journal:  Arch Pediatr Adolesc Med       Date:  1995-12
  8 in total
  10 in total

1.  Scaling a data retrieval and mining application to the enterprise-wide level.

Authors:  D J Nigrin; I S Kohane
Journal:  Proc AMIA Symp       Date:  1999

2.  Extended SQL for manipulating clinical warehouse data.

Authors:  S B Johnson; D Chatziantoniou
Journal:  Proc AMIA Symp       Date:  1999

3.  Temporal expressiveness in querying a time-stamp--based clinical database.

Authors:  D J Nigrin; I S Kohane
Journal:  J Am Med Inform Assoc       Date:  2000 Mar-Apr       Impact factor: 4.497

4.  Informatics tools to monitor progress and outcomes of patients with drug resistant tuberculosis in Peru.

Authors:  Hamish S F Fraser; Darius Jazayeri; Carole D Mitnick; Joia S Mukherjee; Jaime Bayona
Journal:  Proc AMIA Symp       Date:  2002

5.  Metadata-driven ad hoc query of patient data: meeting the needs of clinical studies.

Authors:  Aniruddha M Deshpande; Cynthia Brandt; Prakash M Nadkarni
Journal:  J Am Med Inform Assoc       Date:  2002 Jul-Aug       Impact factor: 4.497

6.  Development of a Google-based search engine for data mining radiology reports.

Authors:  Joseph P Erinjeri; Daniel Picus; Fred W Prior; David A Rubin; Paul Koppel
Journal:  J Digit Imaging       Date:  2008-04-05       Impact factor: 4.056

7.  The Shared Health Research Information Network (SHRINE): a prototype federated query tool for clinical data repositories.

Authors:  Griffin M Weber; Shawn N Murphy; Andrew J McMurry; Douglas Macfadden; Daniel J Nigrin; Susanne Churchill; Isaac S Kohane
Journal:  J Am Med Inform Assoc       Date:  2009-06-30       Impact factor: 4.497

Review 8.  Reuse of clinical data.

Authors:  C Safran
Journal:  Yearb Med Inform       Date:  2014-08-15

9.  A visual interface designed for novice users to find research patient cohorts in a large biomedical database.

Authors:  Shawn N Murphy; Vivian Gainer; Henry C Chueh
Journal:  AMIA Annu Symp Proc       Date:  2003

10.  Modular design, application architecture, and usage of a self-service model for enterprise data delivery: the Duke Enterprise Data Unified Content Explorer (DEDUCE).

Authors:  Monica M Horvath; Shelley A Rusincovitch; Stephanie Brinson; Howard C Shang; Steve Evans; Jeffrey M Ferranti
Journal:  J Biomed Inform       Date:  2014-07-19       Impact factor: 6.317

  10 in total

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