Literature DB >> 9847223

Olfactory Receptor Database: a database of the largest eukaryotic gene family.

E Skoufos1, M D Healy, M S Singer, P M Nadkarni, P L Miller, G M Shepherd.   

Abstract

The Olfactory Receptor Database (ORDB) is a WWW-accessible database that stores data on Olfactory Receptor-like molecules (ORs) and has been open to the public since June 1996. It contains a public and a private area. The public area includes published DNA and protein sequence data for ORs, links to OR models and data on their expression, chromosomal localization and source organism, as well as (i) links to bibliography through PubMed and (ii) interactive WWW-based tools, such as BLAST homology searching. The private area functions as a service to laboratories that are actively cloning receptors. Source laboratories enter the sequences of the receptor clones they have characterized to the private database and can search for identical or near identical OR sequences in both public and private databases. If another laboratory has cloned and deposited an identical or closely matching sequence there are means for communication between the laboratories to help avoid duplication of work. ORDB is available via the WWW at http://crepe.med.yale.edu/ORDB/HTML

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Year:  1999        PMID: 9847223      PMCID: PMC148178          DOI: 10.1093/nar/27.1.343

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  10 in total

1.  Olfactory receptor database: a sensory chemoreceptor resource.

Authors:  E Skoufos; L Marenco; P M Nadkarni; P L Miller; G M Shepherd
Journal:  Nucleic Acids Res       Date:  2000-01-01       Impact factor: 16.971

2.  Olfactory Receptor Database: a metadata-driven automated population from sources of gene and protein sequences.

Authors:  Chiquito Crasto; Luis Marenco; Perry Miller; Gordon Shepherd
Journal:  Nucleic Acids Res       Date:  2002-01-01       Impact factor: 16.971

3.  Opportunities at the intersection of bioinformatics and health informatics: a case study.

Authors:  P L Miller
Journal:  J Am Med Inform Assoc       Date:  2000 Sep-Oct       Impact factor: 4.497

Review 4.  A new challenge-development of test systems for the infochemical effect.

Authors:  Ursula Klaschka
Journal:  Environ Sci Pollut Res Int       Date:  2009-02-03       Impact factor: 4.223

5.  Integration of multidisciplinary sensory data: a pilot model of the human brain project approach.

Authors:  P L Miller; P Nadkarni; M Singer; L Marenco; M Hines; G Shepherd
Journal:  J Am Med Inform Assoc       Date:  2001 Jan-Feb       Impact factor: 4.497

6.  Building the Chordata Olfactory Receptor Database using more than 400,000 receptors annotated by Genome2OR.

Authors:  Wei Han; Yiran Wu; Liting Zeng; Suwen Zhao
Journal:  Sci China Life Sci       Date:  2022-06-10       Impact factor: 6.038

7.  Databases in SenseLab for the genomics, proteomics, and function of olfactory receptors.

Authors:  Luis N Marenco; Gautam Bahl; Lorra Hyland; Jing Shi; Rixin Wang; Peter C Lai; Perry L Miller; Gordon M Shepherd; Chiquito J Crasto
Journal:  Methods Mol Biol       Date:  2013

8.  Family structure and phylogenetic analysis of odorant receptor genes in the large yellow croaker (Larimichthys crocea).

Authors:  Yingsong Zhou; Xiaojun Yan; Shanliang Xu; Peng Zhu; Xianxing He; Jianxin Liu
Journal:  BMC Evol Biol       Date:  2011-08-11       Impact factor: 3.260

9.  The human olfactory receptor repertoire.

Authors:  S Zozulya; F Echeverri; T Nguyen
Journal:  Genome Biol       Date:  2001-06-01       Impact factor: 13.583

10.  ORDB, HORDE, ODORactor and other on-line knowledge resources of olfactory receptor-odorant interactions.

Authors:  Luis Marenco; Rixin Wang; Robert McDougal; Tsviya Olender; Michal Twik; Elspeth Bruford; Xinyi Liu; Jian Zhang; Doron Lancet; Gordon Shepherd; Chiquito Crasto
Journal:  Database (Oxford)       Date:  2016-10-02       Impact factor: 3.451

  10 in total

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