Literature DB >> 9806889

Structural and functional properties of a yeast xylitol dehydrogenase, a Zn2+-containing metalloenzyme similar to medium-chain sorbitol dehydrogenases.

R Lunzer1, Y Mamnun, D Haltrich, K D Kulbe, B Nidetzky.   

Abstract

The NAD+-dependent xylitol dehydrogenase from the xylose-assimilating yeast Galactocandida mastotermitis has been purified in high yield (80%) and characterized. Xylitol dehydrogenase is a heteronuclear multimetal protein that forms homotetramers and contains 1 mol of Zn2+ ions and 6 mol of Mg2+ ions per mol of 37.4 kDa protomer. Treatment with chelating agents such as EDTA results in the removal of the Zn2+ ions with a concomitant loss of enzyme activity. The Mg2+ ions are not essential for activity and are removed by chelation or extensive dialysis without affecting the stability of the enzyme. Results of initial velocity studies at steady state for d-sorbitol oxidation and d-fructose reduction together with the characteristic patterns of product inhibition point to a compulsorily ordered Theorell-Chance mechanism of xylitol dehydrogenase in which coenzyme binds first and leaves last. At pH 7.5, the binding of NADH (Ki approximately 10 microM) is approx. 80-fold tighter than that of NAD+. Polyhydroxyalcohols require at least five carbon atoms to be good substrates of xylitol dehydrogenase, and the C-2 (S), C-3 (R) and C-4 (R) configuration is preferred. Therefore xylitol dehydrogenase shares structural and functional properties with medium-chain sorbitol dehydrogenases.

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Year:  1998        PMID: 9806889      PMCID: PMC1219846          DOI: 10.1042/bj3360091

Source DB:  PubMed          Journal:  Biochem J        ISSN: 0264-6021            Impact factor:   3.857


  29 in total

1.  Evolutionary optimization of the catalytic effectiveness of an enzyme.

Authors:  J J Burbaum; R T Raines; W J Albery; J R Knowles
Journal:  Biochemistry       Date:  1989-11-28       Impact factor: 3.162

2.  Sequence and analysis of an aldose (xylose) reductase gene from the xylose-fermenting yeast Pachysolen tannophilus.

Authors:  P L Bolen; G T Hayman; H S Shepherd
Journal:  Yeast       Date:  1996-10       Impact factor: 3.239

3.  Molecular aspects of functional differences between alcohol and sorbitol dehydrogenases.

Authors:  H Eklund; E Horjales; H Jörnvall; C I Brändén; J Jeffery
Journal:  Biochemistry       Date:  1985-12-31       Impact factor: 3.162

4.  Methylglyoxal and the polyol pathway. Three-carbon compounds are substrates for sheep liver sorbitol dehydrogenase.

Authors:  R I Lindstad; J S McKinley-McKee
Journal:  FEBS Lett       Date:  1993-09-06       Impact factor: 4.124

Review 5.  Protein purification by dye-ligand chromatography.

Authors:  P M Boyer; J T Hsu
Journal:  Adv Biochem Eng Biotechnol       Date:  1993       Impact factor: 2.635

6.  Inhibition and activation studies on sheep liver sorbitol dehydrogenase.

Authors:  R I Lindstad; L F Hermansen; J S McKinley-McKee
Journal:  Eur J Biochem       Date:  1994-04-15

7.  Affinity labelling of sorbitol dehydrogenase from sheep liver with alpha-bromo-beta-(5-imidazolyl)propionic acid.

Authors:  H Reiersen; K Sletten; J S McKinley-McKee
Journal:  Eur J Biochem       Date:  1993-02-01

8.  Xylitol production by recombinant Saccharomyces cerevisiae.

Authors:  J Hallborn; M Walfridsson; U Airaksinen; H Ojamo; B Hahn-Hägerdal; M Penttilä; S Keräsnen
Journal:  Biotechnology (N Y)       Date:  1991-11

9.  Dual relationships of xylitol and alcohol dehydrogenases in families of two protein types.

Authors:  B Persson; J Hallborn; M Walfridsson; B Hahn-Hägerdal; S Keränen; M Penttilä; H Jörnvall
Journal:  FEBS Lett       Date:  1993-06-07       Impact factor: 4.124

Review 10.  Short-chain dehydrogenases/reductases (SDR).

Authors:  H Jörnvall; B Persson; M Krook; S Atrian; R Gonzàlez-Duarte; J Jeffery; D Ghosh
Journal:  Biochemistry       Date:  1995-05-09       Impact factor: 3.162

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  14 in total

1.  Elimination of glycerol and replacement with alternative products in ethanol fermentation by Saccharomyces cerevisiae.

Authors:  Vishist K Jain; Benoit Divol; Bernard A Prior; Florian F Bauer
Journal:  J Ind Microbiol Biotechnol       Date:  2010-12-25       Impact factor: 3.346

2.  Xylitol production from DEO hydrolysate of corn stover by Pichia stipitis YS-30.

Authors:  Rita C L B Rodrigues; William R Kenealy; Thomas W Jeffries
Journal:  J Ind Microbiol Biotechnol       Date:  2011-03-22       Impact factor: 3.346

Review 3.  Valorisation of xylose to renewable fuels and chemicals, an essential step in augmenting the commercial viability of lignocellulosic biorefineries.

Authors:  Vivek Narisetty; Rylan Cox; Rajesh Bommareddy; Deepti Agrawal; Ejaz Ahmad; Kamal Kumar Pant; Anuj Kumar Chandel; Shashi Kant Bhatia; Dinesh Kumar; Parmeswaran Binod; Vijai Kumar Gupta; Vinod Kumar
Journal:  Sustain Energy Fuels       Date:  2021-10-26       Impact factor: 6.367

4.  Structure of xylose reductase bound to NAD+ and the basis for single and dual co-substrate specificity in family 2 aldo-keto reductases.

Authors:  Kathryn L Kavanagh; Mario Klimacek; Bernd Nidetzky; David K Wilson
Journal:  Biochem J       Date:  2003-07-15       Impact factor: 3.857

5.  D-xylose metabolism in Hypocrea jecorina: loss of the xylitol dehydrogenase step can be partially compensated for by lad1-encoded L-arabinitol-4-dehydrogenase.

Authors:  Bernhard Seiboth; Lukas Hartl; Manuela Pail; Christian P Kubicek
Journal:  Eukaryot Cell       Date:  2003-10

6.  Catalytic mechanism of Zn2+-dependent polyol dehydrogenases: kinetic comparison of sheep liver sorbitol dehydrogenase with wild-type and Glu154-->Cys forms of yeast xylitol dehydrogenase.

Authors:  Mario Klimacek; Heidemarie Hellmer; Bernd Nidetzky
Journal:  Biochem J       Date:  2007-06-15       Impact factor: 3.857

7.  Construction of recombinant Escherichia coli expressing xylitol-4-dehydrogenase and optimization for enhanced L-xylulose biotransformation from xylitol.

Authors:  Mesfin Angaw Tesfay; Xin Wen; Yujie Liu; Huibin Lin; Linxu Chen; Jianqiang Lin; Jianqun Lin
Journal:  Bioprocess Biosyst Eng       Date:  2021-01-22       Impact factor: 3.210

8.  Analysis and prediction of the physiological effects of altered coenzyme specificity in xylose reductase and xylitol dehydrogenase during xylose fermentation by Saccharomyces cerevisiae.

Authors:  Stefan Krahulec; Mario Klimacek; Bernd Nidetzky
Journal:  J Biotechnol       Date:  2011-08-25       Impact factor: 3.307

9.  Altering the coenzyme preference of xylose reductase to favor utilization of NADH enhances ethanol yield from xylose in a metabolically engineered strain of Saccharomyces cerevisiae.

Authors:  Barbara Petschacher; Bernd Nidetzky
Journal:  Microb Cell Fact       Date:  2008-03-17       Impact factor: 5.328

10.  Identification of novel metabolic interactions controlling carbon flux from xylose to ethanol in natural and recombinant yeasts.

Authors:  Gert Trausinger; Christoph Gruber; Stefan Krahulec; Christoph Magnes; Bernd Nidetzky; Mario Klimacek
Journal:  Biotechnol Biofuels       Date:  2015-09-25       Impact factor: 6.040

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