Literature DB >> 9752002

Rapid measurement of scalar three-bond 1HN-1H alpha spin coupling constants in 15N-labelled proteins.

H Ponstingl1, G Otting.   

Abstract

Two new 2D NMR experiments, CT-HMQC-HA and CT-HMQC-HN, are proposed for the rapid measurement of homonuclear 3JHNH alpha coupling constants of uniformly 15N-enriched proteins in solution. The experiments are based on the comparison of the signal intensities in a pair of constant-time [15N,1H]-HMQC spectra recorded with and without decoupling of the amide proton-alpha proton coupling. Experimental data recorded with the 78-residue N-terminal domain of the E. coli arginine repressor (ArgR-N) and with oxidized E. coli flavodoxin (176 residues) showed good agreement with 3JHNH alpha coupling constants obtained by fitting of the multiplet fine structure of the amide proton resonances or from a 3D HNHA-J experiment, respectively. Quantitative estimates for the effects from different relaxation rates of in-phase and antiphase magnetization are given.

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Year:  1998        PMID: 9752002     DOI: 10.1023/a:1008293016073

Source DB:  PubMed          Journal:  J Biomol NMR        ISSN: 0925-2738            Impact factor:   2.835


  7 in total

1.  Determination of H(N),H (α) and H (N),C' coupling constants in (13)C, (15)N-labeled proteins.

Authors:  R Weisemann; H Rüterjans; H Schwalbe; J Schleucher; W Bermel; C Griesinger
Journal:  J Biomol NMR       Date:  1994-03       Impact factor: 2.835

2.  (H)NCAHA and (H)CANNH experiments for the determination of the vicinal coupling constants related to the phi-torsion angle.

Authors:  F Löhr; H Rüterjans
Journal:  J Biomol NMR       Date:  1995-01       Impact factor: 2.835

3.  A flavodoxin that is required for enzyme activation: the structure of oxidized flavodoxin from Escherichia coli at 1.8 A resolution.

Authors:  D M Hoover; M L Ludwig
Journal:  Protein Sci       Date:  1997-12       Impact factor: 6.725

4.  Solution structure of the DNA-binding domain and model for the complex of multifunctional hexameric arginine repressor with DNA.

Authors:  M Sunnerhagen; M Nilges; G Otting; J Carey
Journal:  Nat Struct Biol       Date:  1997-10

5.  NMR assignments, secondary structure and hydration of oxidized Escherichia coli flavodoxin.

Authors:  H Ponstingl; G Otting
Journal:  Eur J Biochem       Date:  1997-03-01

6.  Precise vicinal coupling constants 3JHN alpha in proteins from nonlinear fits of J-modulated [15N,1H]-COSY experiments.

Authors:  M Billeter; D Neri; G Otting; Y Q Qian; K Wüthrich
Journal:  J Biomol NMR       Date:  1992-05       Impact factor: 2.835

7.  Measurement of HN-H alpha J couplings in calcium-free calmodulin using new 2D and 3D water-flip-back methods.

Authors:  H Kuboniwa; S Grzesiek; F Delaglio; A Bax
Journal:  J Biomol NMR       Date:  1994-11       Impact factor: 2.835

  7 in total
  7 in total

1.  Intensity modulated HSQC and HMQC: two simple methods to measure 3J(HNH)alpha in proteins.

Authors:  P Permi; I Kilpeläinen; A Annila; S Heikkinen
Journal:  J Biomol NMR       Date:  2000-01       Impact factor: 2.835

2.  Amino-acid type identification in 15N-HSQC spectra by combinatorial selective 15N-labelling.

Authors:  Peter S C Wu; Kiyoshi Ozawa; Slobodan Jergic; Xun-Cheng Su; Nicholas E Dixon; Gottfried Otting
Journal:  J Biomol NMR       Date:  2006-01       Impact factor: 2.835

3.  Measurement of homonuclear three-bond J(H(N)Halpha) coupling constants in unlabeled peptides complexed with labeled proteins: application to a decapeptide inhibitor bound to the proteinase domain of the NS3 protein of hepatitis C virus (HCV).

Authors:  D O Cicero; G Barbato; U Koch; P Ingallinella; E Bianchi; S Sambucini; P Neddermann; R De Francesco; A Pessi; R Bazzo
Journal:  J Biomol NMR       Date:  2001-05       Impact factor: 2.835

4.  Improved accuracy in measuring one-bond and two-bond (15)N, (13)C (α) coupling constants in proteins by double-inphase/antiphase (DIPAP) spectroscopy.

Authors:  Frank Löhr; Sina Reckel; Susanne Stefer; Volker Dötsch; Jürgen M Schmidt
Journal:  J Biomol NMR       Date:  2011-06-07       Impact factor: 2.835

Review 5.  NMR studies of a new family of DNA binding proteins: the THAP proteins.

Authors:  Virginie Gervais; Sébastien Campagne; Jade Durand; Isabelle Muller; Alain Milon
Journal:  J Biomol NMR       Date:  2013-01-11       Impact factor: 2.835

6.  Sensitive 1H-31P correlations with 5' methylene protons of DNA via homonuclear double-quantum coherence.

Authors:  A Kaikkonen; G Otting
Journal:  J Biomol NMR       Date:  2001-03       Impact factor: 2.835

7.  Comprehensive determination of (3)J (HNHalpha) for unfolded proteins using (13)C'-resolved spin-echo difference spectroscopy.

Authors:  Renee Otten; Kathleen Wood; Frans A A Mulder
Journal:  J Biomol NMR       Date:  2009-11-07       Impact factor: 2.835

  7 in total

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