Literature DB >> 23306615

NMR studies of a new family of DNA binding proteins: the THAP proteins.

Virginie Gervais1, Sébastien Campagne, Jade Durand, Isabelle Muller, Alain Milon.   

Abstract

The THAP (THanatos-Associated Protein) domain is an evolutionary conserved C2CH zinc-coordinating domain shared with a large family of cellular factors (THAP proteins). Many members of the THAP family act as transcription factors that control cell proliferation, cell cycle progression, angiogenesis, apoptosis and epigenetic gene silencing. They recognize specific DNA sequences in the promoters of target genes and subsequently recruit effector proteins. Recent structural and functional studies have allowed getting better insight into the nuclear and cellular functions of some THAP members and the molecular mechanisms by which they recognize DNA. The present article reviews recent advances in the knowledge of the THAP domains structures and their interaction with DNA, with a particular focus on NMR. It provides the solution structure of the THAP domain of THAP11, a recently characterized human THAP protein with important functions in transcription and cell growth in colon cancer.

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Year:  2013        PMID: 23306615     DOI: 10.1007/s10858-012-9699-1

Source DB:  PubMed          Journal:  J Biomol NMR        ISSN: 0925-2738            Impact factor:   2.835


  47 in total

1.  Using NMRView to visualize and analyze the NMR spectra of macromolecules.

Authors:  Bruce A Johnson
Journal:  Methods Mol Biol       Date:  2004

2.  Solution structure of the THAP domain from Caenorhabditis elegans C-terminal binding protein (CtBP).

Authors:  Chu Kong Liew; Merlin Crossley; Joel P Mackay; Hannah R Nicholas
Journal:  J Mol Biol       Date:  2006-11-18       Impact factor: 5.469

3.  Novel human pathological mutations. Gene symbol: THAP1. Disease: dystonia 6.

Authors:  Jianfeng Xiao
Journal:  Hum Genet       Date:  2010-04       Impact factor: 4.132

4.  Protein backbone angle restraints from searching a database for chemical shift and sequence homology.

Authors:  G Cornilescu; F Delaglio; A Bax
Journal:  J Biomol NMR       Date:  1999-03       Impact factor: 2.835

5.  Ronin/Hcf-1 binds to a hyperconserved enhancer element and regulates genes involved in the growth of embryonic stem cells.

Authors:  Marion Dejosez; Stuart S Levine; Garrett M Frampton; Warren A Whyte; Sabrina A Stratton; Michelle C Barton; Preethi H Gunaratne; Richard A Young; Thomas P Zwaka
Journal:  Genes Dev       Date:  2010-06-25       Impact factor: 11.361

Review 6.  Molecular pathways in dystonia.

Authors:  D Cristopher Bragg; Ioanna A Armata; Flavia C Nery; Xandra O Breakefield; Nutan Sharma
Journal:  Neurobiol Dis       Date:  2010-12-04       Impact factor: 5.996

7.  THAP1 is a nuclear proapoptotic factor that links prostate-apoptosis-response-4 (Par-4) to PML nuclear bodies.

Authors:  Myriam Roussigne; Corinne Cayrol; Thomas Clouaire; François Amalric; Jean-Philippe Girard
Journal:  Oncogene       Date:  2003-04-24       Impact factor: 9.867

8.  Structural determinants of specific DNA-recognition by the THAP zinc finger.

Authors:  Sébastien Campagne; Olivier Saurel; Virginie Gervais; Alain Milon
Journal:  Nucleic Acids Res       Date:  2010-02-09       Impact factor: 16.971

9.  Mutations in THAP1 (DYT6) in early-onset dystonia: a genetic screening study.

Authors:  Susan B Bressman; Deborah Raymond; Tania Fuchs; Gary A Heiman; Laurie J Ozelius; Rachel Saunders-Pullman
Journal:  Lancet Neurol       Date:  2009-04-01       Impact factor: 44.182

10.  THAP5 is a human cardiac-specific inhibitor of cell cycle that is cleaved by the proapoptotic Omi/HtrA2 protease during cell death.

Authors:  Meenakshi P Balakrishnan; Lucia Cilenti; Zineb Mashak; Paiyal Popat; Emad S Alnemri; Antonis S Zervos
Journal:  Am J Physiol Heart Circ Physiol       Date:  2009-06-05       Impact factor: 4.733

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  13 in total

1.  Genomic Determinants of THAP11/ZNF143/HCFC1 Complex Recruitment to Chromatin.

Authors:  Aurimas Vinckevicius; J Brandon Parker; Debabrata Chakravarti
Journal:  Mol Cell Biol       Date:  2015-09-28       Impact factor: 4.272

2.  Host cell factor-1 recruitment to E2F-bound and cell-cycle-control genes is mediated by THAP11 and ZNF143.

Authors:  J Brandon Parker; Hanwei Yin; Aurimas Vinckevicius; Debabrata Chakravarti
Journal:  Cell Rep       Date:  2014-10-30       Impact factor: 9.423

3.  Mutations in THAP11 cause an inborn error of cobalamin metabolism and developmental abnormalities.

Authors:  Anita M Quintana; Hung-Chun Yu; Alison Brebner; Mihaela Pupavac; Elizabeth A Geiger; Abigail Watson; Victoria L Castro; Warren Cheung; Shu-Huang Chen; David Watkins; Tomi Pastinen; Flemming Skovby; Bruce Appel; David S Rosenblatt; Tamim H Shaikh
Journal:  Hum Mol Genet       Date:  2017-08-01       Impact factor: 6.150

4.  NMR studies on protein-nucleic acid interaction.

Authors:  Robert Kaptein
Journal:  J Biomol NMR       Date:  2013-05       Impact factor: 2.835

5.  Abnormalities of motor function, transcription and cerebellar structure in mouse models of THAP1 dystonia.

Authors:  Marta Ruiz; Georgina Perez-Garcia; Maitane Ortiz-Virumbrales; Aurelie Méneret; Andrika Morant; Jessica Kottwitz; Tania Fuchs; Justine Bonet; Pedro Gonzalez-Alegre; Patrick R Hof; Laurie J Ozelius; Michelle E Ehrlich
Journal:  Hum Mol Genet       Date:  2015-09-16       Impact factor: 6.150

6.  HIM-17 regulates the position of recombination events and GSP-1/2 localization to establish short arm identity on bivalents in meiosis.

Authors:  Saravanapriah Nadarajan; Elisabeth Altendorfer; Takamune T Saito; Marina Martinez-Garcia; Monica P Colaiácovo
Journal:  Proc Natl Acad Sci U S A       Date:  2021-04-27       Impact factor: 11.205

7.  Dystonia type 6 gene product Thap1: identification of a 50 kDa DNA-binding species in neuronal nuclear fractions.

Authors:  Maitane Ortiz-Virumbrales; Marta Ruiz; Eugene Hone; Georgia Dolios; Rong Wang; Andrika Morant; Jessica Kottwitz; Laurie J Ozelius; Sam Gandy; Michelle E Ehrlich
Journal:  Acta Neuropathol Commun       Date:  2014-09-18       Impact factor: 7.801

8.  THAP1: Role in Mouse Embryonic Stem Cell Survival and Differentiation.

Authors:  Francesca Aguilo; Zuchra Zakirova; Katie Nolan; Ryan Wagner; Rajal Sharma; Megan Hogan; Chengguo Wei; Yifei Sun; Martin J Walsh; Kevin Kelley; Weijia Zhang; Laurie J Ozelius; Pedro Gonzalez-Alegre; Thomas P Zwaka; Michelle E Ehrlich
Journal:  Stem Cell Reports       Date:  2017-06-01       Impact factor: 7.765

9.  Classification of the human THAP protein family identifies an evolutionarily conserved coiled coil region.

Authors:  Hiral M Sanghavi; Sairam S Mallajosyula; Sharmistha Majumdar
Journal:  BMC Struct Biol       Date:  2019-03-05

10.  THAP7 promotes cell proliferation by regulating the G1/S phase transition via epigenetically silencing p21 in lung adenocarcinoma.

Authors:  Cai-Ping Chen; Yi Sang; Lijuan Liu; Zhi-Qi Feng; Zibin Liang; Xiaofeng Pei
Journal:  Onco Targets Ther       Date:  2019-07-12       Impact factor: 4.147

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