Literature DB >> 9746535

Thermal motions in bacteriorhodopsin at different hydration levels studied by neutron scattering: correlation with kinetics and light-induced conformational changes.

U Lehnert1, V Réat, M Weik, G Zaccaï, C Pfister.   

Abstract

Bacteriorhodopsin (BR) is a transmembrane protein in the purple membrane (PM) of Halobacterium salinarum. Its function as a light-driven proton pump is associated with a cycle of photointermediates which is strongly hydration-dependent. Using energy-resolved neutron scattering, we analyzed the thermal motions (in the nanosecond-to-picosecond time range) in PM at different hydration levels. Two main populations of motions were found that responded differently to water binding. Striking correlations appeared between these "fast" motions and the "slower" kinetic constants (in the millisecond time range) of relaxations and conformational changes occurring during the photocycle.

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Year:  1998        PMID: 9746535      PMCID: PMC1299865          DOI: 10.1016/S0006-3495(98)77635-0

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  32 in total

1.  Crystalline ribonuclease A loses function below the dynamical transition at 220 K.

Authors:  B F Rasmussen; A M Stock; D Ringe; G A Petsko
Journal:  Nature       Date:  1992-06-04       Impact factor: 49.962

2.  Surface-bound optical probes monitor protein translocation and surface potential changes during the bacteriorhodopsin photocycle.

Authors:  J Heberle; N A Dencher
Journal:  Proc Natl Acad Sci U S A       Date:  1992-07-01       Impact factor: 11.205

3.  Temperature dependence of dynamics of hydrated myoglobin. Comparison of force field calculations with neutron scattering data.

Authors:  R J Loncharich; B R Brooks
Journal:  J Mol Biol       Date:  1990-10-05       Impact factor: 5.469

Review 4.  Protein hydration and function.

Authors:  J A Rupley; G Careri
Journal:  Adv Protein Chem       Date:  1991

5.  Thermodynamics and energy coupling in the bacteriorhodopsin photocycle.

Authors:  G Váró; J K Lanyi
Journal:  Biochemistry       Date:  1991-05-21       Impact factor: 3.162

6.  Dynamical transition of myoglobin revealed by inelastic neutron scattering.

Authors:  W Doster; S Cusack; W Petry
Journal:  Nature       Date:  1989-02-23       Impact factor: 49.962

7.  Distortions in the photocycle of bacteriorhodopsin at moderate dehydration.

Authors:  G Váró; J K Lanyi
Journal:  Biophys J       Date:  1991-02       Impact factor: 4.033

8.  Structure and hydration of purple membranes in different conditions.

Authors:  G Zaccai
Journal:  J Mol Biol       Date:  1987-04-05       Impact factor: 5.469

9.  Infrared spectroscopic demonstration of a conformational change in bacteriorhodopsin involved in proton pumping.

Authors:  P Ormos
Journal:  Proc Natl Acad Sci U S A       Date:  1991-01-15       Impact factor: 11.205

10.  Water is required for proton transfer from aspartate-96 to the bacteriorhodopsin Schiff base.

Authors:  Y Cao; G Váró; M Chang; B F Ni; R Needleman; J K Lanyi
Journal:  Biochemistry       Date:  1991-11-12       Impact factor: 3.162

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  44 in total

1.  Protein flexibility from the dynamical transition: a force constant analysis.

Authors:  D J Bicout; G Zaccai
Journal:  Biophys J       Date:  2001-03       Impact factor: 4.033

2.  Simulation analysis of the retinal conformational equilibrium in dark-adapted bacteriorhodopsin.

Authors:  J Baudry; S Crouzy; B Roux; J C Smith
Journal:  Biophys J       Date:  1999-04       Impact factor: 4.033

3.  The dynamics of protein hydration water: a quantitative comparison of molecular dynamics simulations and neutron-scattering experiments.

Authors:  M Tarek; D J Tobias
Journal:  Biophys J       Date:  2000-12       Impact factor: 4.033

4.  Temperature dependence of protein dynamics: computer simulation analysis of neutron scattering properties.

Authors:  Jennifer A Hayward; Jeremy C Smith
Journal:  Biophys J       Date:  2002-03       Impact factor: 4.033

5.  Dynamic transition associated with the thermal denaturation of a small Beta protein.

Authors:  Daniela Russo; Javier Pérez; Jean-Marc Zanotti; Michel Desmadril; Dominique Durand
Journal:  Biophys J       Date:  2002-11       Impact factor: 4.033

6.  Adaptation to extreme environments: macromolecular dynamics in bacteria compared in vivo by neutron scattering.

Authors:  Moeava Tehei; Bruno Franzetti; Dominique Madern; Margaret Ginzburg; Ben Z Ginzburg; Marie-Thérèse Giudici-Orticoni; Mireille Bruschi; Giuseppe Zaccai
Journal:  EMBO Rep       Date:  2004-01       Impact factor: 8.807

7.  Effect of the environment on the protein dynamical transition: a neutron scattering study.

Authors:  Alessandro Paciaroni; Stefania Cinelli; Giuseppe Onori
Journal:  Biophys J       Date:  2002-08       Impact factor: 4.033

8.  Relaxation kinetics and the glassiness of proteins: the case of bovine pancreatic trypsin inhibitor.

Authors:  Canan Baysal; Ali Rana Atilgan
Journal:  Biophys J       Date:  2002-08       Impact factor: 4.033

Review 9.  The effect of water on protein dynamics.

Authors:  G Zaccai
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2004-08-29       Impact factor: 6.237

10.  Neutron frequency windows and the protein dynamical transition.

Authors:  Torsten Becker; Jennifer A Hayward; John L Finney; Roy M Daniel; Jeremy C Smith
Journal:  Biophys J       Date:  2004-09       Impact factor: 4.033

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