Literature DB >> 2036368

Thermodynamics and energy coupling in the bacteriorhodopsin photocycle.

G Váró1, J K Lanyi.   

Abstract

Time-resolved absorption changes of photoexcited bacteriorhodopsin were measured with a gated multichannel analyzer between 100 ns and 100 ms at six temperatures between 5 and 30 degrees C. The energetics of the chromophore reaction cycle were analyzed on the basis of a model containing a single cycle and reversible reactions. The calculated thermodynamic parameters provide insights to general principles of the active transport. They indicate that in this light-driven proton pump the free energy is retained after absorption of the photon as the enthalpy of the pKa shift in the chromophore which allows deprotonation of the Schiff base. Part of the excess free energy is dissipated at the "switch" step where the reaction and transport cycles are coupled, and the rest at the chromophore recovery step. All other reactions take place near equilibrium. The "switch" step is the M1----M2 transition in the reaction cycle [Váró, G., & Lanyi, J. K. (1991) Biochemistry (preceeding paper in this issue)]. It provides for return of the chromophore pKa to its initial value so the Schiff base will become a proton acceptor, for reordering access of the Schiff base from one side of the membrane to the other, and for unidirectionality of the proton transfer. Conformational energy of the protein, acquired during the "switch" step, drives the completion of the photocycle.

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Year:  1991        PMID: 2036368     DOI: 10.1021/bi00234a025

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  69 in total

1.  Buffer effects on electric signals of light-excited bacteriorhodopsin.

Authors:  R Tóth-Boconádi; A Dér; L Keszthelyi
Journal:  Biophys J       Date:  2000-06       Impact factor: 4.033

2.  Singular value decomposition with self-modeling applied to determine bacteriorhodopsin intermediate spectra: analysis of simulated data.

Authors:  L Zimányi; A Kulcsár; J K Lanyi; D F Sears; J Saltiel
Journal:  Proc Natl Acad Sci U S A       Date:  1999-04-13       Impact factor: 11.205

3.  Time-resolved step-scan Fourier transform infrared spectroscopy reveals differences between early and late M intermediates of bacteriorhodopsin.

Authors:  C Rödig; I Chizhov; O Weidlich; F Siebert
Journal:  Biophys J       Date:  1999-05       Impact factor: 4.033

4.  A study on the mechanism of the proton transport in bacteriorhodopsin: the importance of the water molecule.

Authors:  K Murata; Y Fujii; N Enomoto; M Hata; T Hoshino; M Tsuda
Journal:  Biophys J       Date:  2000-08       Impact factor: 4.033

5.  Structural changes in bacteriorhodopsin during the photocycle measured by time-resolved polarized Fourier transform infrared spectroscopy.

Authors:  L Kelemen; P Ormos
Journal:  Biophys J       Date:  2001-12       Impact factor: 4.033

Review 6.  Pathways of proton transfer in the light-driven pump bacteriorhodopsin.

Authors:  J K Lanyi
Journal:  Experientia       Date:  1993-07-05

7.  Subsecond proton-hole propagation in bacteriorhodopsin.

Authors:  Bettina Schätzler; Norbert A Dencher; Joerg Tittor; Dieter Oesterhelt; Sharon Yaniv-Checover; Esther Nachliel; Menachem Gutman
Journal:  Biophys J       Date:  2003-01       Impact factor: 4.033

8.  Characterization of the photochemical reaction cycle of proteorhodopsin.

Authors:  György Váró; Leonid S Brown; Melinda Lakatos; Janos K Lanyi
Journal:  Biophys J       Date:  2003-02       Impact factor: 4.033

Review 9.  Proton transfer and energy coupling in the bacteriorhodopsin photocycle.

Authors:  J K Lanyi
Journal:  J Bioenerg Biomembr       Date:  1992-04       Impact factor: 2.945

10.  Molecular mechanism of protein-retinal coupling in bacteriorhodopsin.

Authors:  J K Delaney; U Schweiger; S Subramaniam
Journal:  Proc Natl Acad Sci U S A       Date:  1995-11-21       Impact factor: 11.205

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