Literature DB >> 2009355

Distortions in the photocycle of bacteriorhodopsin at moderate dehydration.

G Váró1, J K Lanyi.   

Abstract

The photoreaction of bacteriorhodopsin was studied in moderately dehydrated films (relative humidities between 100 and 65%). Time-resolved difference spectra from a gated optical multichannel analyzer, between 100 ns and 100 ms after photoexcitation, were decomposed into sums of difference spectra of the intermediates K, L, M, N, and O, and the kinetics obtained were fitted to various alternative schemes. The data confirm the model of a single reaction sequence with reversible reactions we proposed recently for purple membrane suspensions (Váró, G., and J. K. Lanyi. Biochemistry. 1990. 29:2241-2250) but including reversibility also for the reaction K in equilibrium with L in addition to L in equilibrium with M, M in equilibrium with N, and N in equilibrium with O. With increasing dehydration the kinetics were increasingly dominated by the reverse reactions. As before, fitting the data required the existence of two M species in series: L in equilibrium with M1 in equilibrium with M2 in equilibrium with N. The M1 in equilibrium with M2 reaction was greatly slowed at lower humidities. This step might be the switch for the unidirectional transfer of protons. With increasing dehydration recovery of BR occurred less and less via the N intermediate and increasingly via direct shunts from the two M species. As indicated earlier by electrical measurements with similarly dried bacteriorhodopsin films (Váró, G., and L. Keszthelyi, 1983. Biophys. J. 43:47-51). The latter are pathways not necessarily associated with net proton translocation.

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Year:  1991        PMID: 2009355      PMCID: PMC1281148          DOI: 10.1016/S0006-3495(91)82225-1

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  39 in total

1.  Bacteriorhodopsin: a light-driven proton pump in Halobacterium Halobium.

Authors:  R H Lozier; R A Bogomolni; W Stoeckenius
Journal:  Biophys J       Date:  1975-09       Impact factor: 4.033

2.  The role of back-reactions and proton uptake during the N----O transition in bacteriorhodopsin's photocycle: a kinetic resonance Raman study.

Authors:  J B Ames; R A Mathies
Journal:  Biochemistry       Date:  1990-08-07       Impact factor: 3.162

3.  Hydration effects on the photocycle of bacteriorhodopsin in thin layers of purple membrane.

Authors:  R Korenstein; B Hess
Journal:  Nature       Date:  1977-11-10       Impact factor: 49.962

Review 4.  Bacteriorhodopsin and the purple membrane of halobacteria.

Authors:  W Stoeckenius; R H Lozier; R A Bogomolni
Journal:  Biochim Biophys Acta       Date:  1979-03-14

5.  Pathways of the rise and decay of the M photointermediate(s) of bacteriorhodopsin.

Authors:  G Váró; J K Lanyi
Journal:  Biochemistry       Date:  1990-03-06       Impact factor: 3.162

6.  Transient spectroscopy of bacterial rhodopsins with an optical multichannel analyzer. 1. Comparison of the photocycles of bacteriorhodopsin and halorhodopsin.

Authors:  L Zimányi; L Keszthelyi; J K Lanyi
Journal:  Biochemistry       Date:  1989-06-13       Impact factor: 3.162

7.  Photoelectric signals from dried oriented purple membranes of Halobacterium halobium.

Authors:  G Váró; L Keszthelyi
Journal:  Biophys J       Date:  1983-07       Impact factor: 4.033

8.  Infrared studies of water induced conformational changes in bacteriorhodopsin.

Authors:  G Váró; L Eisenstein
Journal:  Eur Biophys J       Date:  1987       Impact factor: 1.733

9.  Replacement of aspartic acid-96 by asparagine in bacteriorhodopsin slows both the decay of the M intermediate and the associated proton movement.

Authors:  M Holz; L A Drachev; T Mogi; H Otto; A D Kaulen; M P Heyn; V P Skulachev; H G Khorana
Journal:  Proc Natl Acad Sci U S A       Date:  1989-04       Impact factor: 11.205

10.  A defective proton pump, point-mutated bacteriorhodopsin Asp96----Asn is fully reactivated by azide.

Authors:  J Tittor; C Soell; D Oesterhelt; H J Butt; E Bamberg
Journal:  EMBO J       Date:  1989-11       Impact factor: 11.598

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  22 in total

1.  Time-resolved step-scan Fourier transform infrared spectroscopy reveals differences between early and late M intermediates of bacteriorhodopsin.

Authors:  C Rödig; I Chizhov; O Weidlich; F Siebert
Journal:  Biophys J       Date:  1999-05       Impact factor: 4.033

2.  Time-resolved x-ray diffraction reveals multiple conformations in the M-N transition of the bacteriorhodopsin photocycle.

Authors:  T Oka; N Yagi; T Fujisawa; H Kamikubo; F Tokunaga; M Kataoka
Journal:  Proc Natl Acad Sci U S A       Date:  2000-12-19       Impact factor: 11.205

3.  Time-resolved X-ray diffraction reveals movement of F helix of D96N bacteriorhodopsin during M-MN transition at neutral pH.

Authors:  Toshihiko Oka; Naoto Yagi; Fumio Tokunaga; Mikio Kataoka
Journal:  Biophys J       Date:  2002-05       Impact factor: 4.033

Review 4.  Proton transfer and energy coupling in the bacteriorhodopsin photocycle.

Authors:  J K Lanyi
Journal:  J Bioenerg Biomembr       Date:  1992-04       Impact factor: 2.945

Review 5.  Low-temperature behavior of water confined by biological macromolecules and its relation to protein dynamics.

Authors:  M Weik
Journal:  Eur Phys J E Soft Matter       Date:  2003-09       Impact factor: 1.890

6.  A residue substitution near the beta-ionone ring of the retinal affects the M substates of bacteriorhodopsin.

Authors:  G Váró; L Zimányi; M Chang; B Ni; R Needleman; J K Lanyi
Journal:  Biophys J       Date:  1992-03       Impact factor: 4.033

7.  Structural transition of bacteriorhodopsin is preceded by deprotonation of Schiff base: microsecond time-resolved x-ray diffraction study of purple membrane.

Authors:  Toshihiko Oka; Katsuaki Inoue; Mikio Kataoka; Naoto Yagi
Journal:  Biophys J       Date:  2004-10-29       Impact factor: 4.033

8.  Hydration dependence of active core fluctuations in bacteriorhodopsin.

Authors:  Kathleen Wood; Ursula Lehnert; Brigitte Kessler; Giuseppe Zaccai; Dieter Oesterhelt
Journal:  Biophys J       Date:  2008-03-13       Impact factor: 4.033

9.  Allosteric Effects of the Proton Donor on the Microbial Proton Pump Proteorhodopsin.

Authors:  Sadegh Faramarzi; Jun Feng; Blake Mertz
Journal:  Biophys J       Date:  2018-08-29       Impact factor: 4.033

10.  Thermal motions in bacteriorhodopsin at different hydration levels studied by neutron scattering: correlation with kinetics and light-induced conformational changes.

Authors:  U Lehnert; V Réat; M Weik; G Zaccaï; C Pfister
Journal:  Biophys J       Date:  1998-10       Impact factor: 4.033

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