Literature DB >> 9537366

Roles of the catalytic domain and two cellulose binding domains of Thermomonospora fusca E4 in cellulose hydrolysis.

D Irwin1, D H Shin, S Zhang, B K Barr, J Sakon, P A Karplus, D B Wilson.   

Abstract

Thermomonospora fusca E4 is an unusual 90.4-kDa endocellulase comprised of a catalytic domain (CD), an internal family IIIc cellulose binding domain (CBD), a fibronectinlike domain, and a family II CBD. Constructs containing the CD alone (E4-51), the CD plus the family IIIc CBD (E4-68), and the CD plus the fibronectinlike domain plus the family II CBD (E4-74) were made by using recombinant DNA techniques. The activities of each purified protein on bacterial microcrystalline cellulose (BMCC), filter paper, swollen cellulose, and carboxymethyl cellulose were measured. Only the whole enzyme, E4-90, could reach the target digestion of 4.5% on filter paper. Removal of the internal family IIIc CBD (E4-51 and E4-74) decreased activity markedly on every substrate. E4-74 did bind to BMCC but had almost no hydrolytic activity, while E4-68 retained 32% of the activity on BMCC even though it did not bind. A low-activity mutant of one of the catalytic bases, E4-68 (Asp55Cys), did bind to BMCC, although E4-51 (Asp55Cys) did not. The ratios of soluble to insoluble reducing sugar produced after filter paper hydrolysis by E4-90, E4-68, E4-74, and E4-51 were 6.9, 3.5, 1.3, and 0.6, respectively, indicating that the family IIIc CBD is important for E4 processivity.

Entities:  

Mesh:

Substances:

Year:  1998        PMID: 9537366      PMCID: PMC107081     

Source DB:  PubMed          Journal:  J Bacteriol        ISSN: 0021-9193            Impact factor:   3.490


  16 in total

1.  Assay of reducing end-groups in oligosaccharide homologues with 2,2'-bicinchoninate.

Authors:  L W Doner; P L Irwin
Journal:  Anal Biochem       Date:  1992-04       Impact factor: 3.365

2.  Crystal structure of a bacterial family-III cellulose-binding domain: a general mechanism for attachment to cellulose.

Authors:  J Tormo; R Lamed; A J Chirino; E Morag; E A Bayer; Y Shoham; T A Steitz
Journal:  EMBO J       Date:  1996-11-01       Impact factor: 11.598

3.  Role of scaffolding protein CipC of Clostridium cellulolyticum in cellulose degradation.

Authors:  S Pagès; L Gal; A Bélaïch; C Gaudin; C Tardif; J P Bélaïch
Journal:  J Bacteriol       Date:  1997-05       Impact factor: 3.490

4.  Separation of [1-3H]cellooligosaccharides by thin-layer chromatography: assay for cellulolytic enzymes.

Authors:  W J Chirico; R D Brown
Journal:  Anal Biochem       Date:  1985-11-01       Impact factor: 3.365

5.  Surface residue mutations which change the substrate specificity of Thermomonospora fusca endoglucanase E2.

Authors:  S Zhang; D B Wilson
Journal:  J Biotechnol       Date:  1997-09-16       Impact factor: 3.307

6.  DNA sequences and expression in Streptomyces lividans of an exoglucanase gene and an endoglucanase gene from Thermomonospora fusca.

Authors:  E D Jung; G Lao; D Irwin; B K Barr; A Benjamin; D B Wilson
Journal:  Appl Environ Microbiol       Date:  1993-09       Impact factor: 4.792

7.  Identification of two functionally different classes of exocellulases.

Authors:  B K Barr; Y L Hsieh; B Ganem; D B Wilson
Journal:  Biochemistry       Date:  1996-01-16       Impact factor: 3.162

8.  Studies on transformation of Escherichia coli with plasmids.

Authors:  D Hanahan
Journal:  J Mol Biol       Date:  1983-06-05       Impact factor: 5.469

9.  Characterization of a Thermomonospora fusca exocellulase.

Authors:  S Zhang; G Lao; D B Wilson
Journal:  Biochemistry       Date:  1995-03-14       Impact factor: 3.162

10.  The relation between the divergence of sequence and structure in proteins.

Authors:  C Chothia; A M Lesk
Journal:  EMBO J       Date:  1986-04       Impact factor: 11.598

View more
  47 in total

1.  The thermostabilizing domain, XynA, of Caldibacillus cellulovorans xylanase is a xylan binding domain.

Authors:  A Sunna; M D Gibbs; P L Bergquist
Journal:  Biochem J       Date:  2000-03-15       Impact factor: 3.857

2.  An intron-containing glycoside hydrolase family 9 cellulase gene encodes the dominant 90 kDa component of the cellulosome of the anaerobic fungus Piromyces sp. strain E2.

Authors:  Peter J M Steenbakkers; Wimal Ubhayasekera; Harry J A M Goossen; Erik M H M van Lierop; Chris van der Drift; Godfried D Vogels; Sherry L Mowbray; Huub J M Op den Camp
Journal:  Biochem J       Date:  2002-07-01       Impact factor: 3.857

3.  Characterization of a cellulase containing a family 30 carbohydrate-binding module (CBM) derived from Clostridium thermocellum CelJ: importance of the CBM to cellulose hydrolysis.

Authors:  Takamitsu Arai; Rie Araki; Akiyoshi Tanaka; Shuichi Karita; Tetsuya Kimura; Kazuo Sakka; Kunio Ohmiya
Journal:  J Bacteriol       Date:  2003-01       Impact factor: 3.490

4.  CelI, a noncellulosomal family 9 enzyme from Clostridium thermocellum, is a processive endoglucanase that degrades crystalline cellulose.

Authors:  Rachel Gilad; Larisa Rabinovich; Sima Yaron; Edward A Bayer; Raphael Lamed; Harry J Gilbert; Yuval Shoham
Journal:  J Bacteriol       Date:  2003-01       Impact factor: 3.490

Review 5.  Microbial cellulose utilization: fundamentals and biotechnology.

Authors:  Lee R Lynd; Paul J Weimer; Willem H van Zyl; Isak S Pretorius
Journal:  Microbiol Mol Biol Rev       Date:  2002-09       Impact factor: 11.056

6.  Costs and benefits of processivity in enzymatic degradation of recalcitrant polysaccharides.

Authors:  Svein J Horn; Pawel Sikorski; Jannicke B Cederkvist; Gustav Vaaje-Kolstad; Morten Sørlie; Bjørnar Synstad; Gert Vriend; Kjell M Vårum; Vincent G H Eijsink
Journal:  Proc Natl Acad Sci U S A       Date:  2006-11-20       Impact factor: 11.205

Review 7.  Cellulase, clostridia, and ethanol.

Authors:  Arnold L Demain; Michael Newcomb; J H David Wu
Journal:  Microbiol Mol Biol Rev       Date:  2005-03       Impact factor: 11.056

8.  X-Ray crystal structure of the multidomain endoglucanase Cel9G from Clostridium cellulolyticum complexed with natural and synthetic cello-oligosaccharides.

Authors:  David Mandelman; Anne Belaich; J P Belaich; Nushin Aghajari; Hugues Driguez; Richard Haser
Journal:  J Bacteriol       Date:  2003-07       Impact factor: 3.490

9.  Cellulase processivity.

Authors:  David B Wilson; Maxim Kostylev
Journal:  Methods Mol Biol       Date:  2012

10.  Calcium and domain interactions contribute to the thermostability of domains of the multimodular cellobiohydrolase, CbhA, a subunit of the Clostridium thermocellum cellulosome.

Authors:  Irina A Kataeva; Vladimir N Uversky; Lars G Ljungdahl
Journal:  Biochem J       Date:  2003-05-15       Impact factor: 3.857

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.