Literature DB >> 12209002

Microbial cellulose utilization: fundamentals and biotechnology.

Lee R Lynd1, Paul J Weimer, Willem H van Zyl, Isak S Pretorius.   

Abstract

Fundamental features of microbial cellulose utilization are examined at successively higher levels of aggregation encompassing the structure and composition of cellulosic biomass, taxonomic diversity, cellulase enzyme systems, molecular biology of cellulase enzymes, physiology of cellulolytic microorganisms, ecological aspects of cellulase-degrading communities, and rate-limiting factors in nature. The methodological basis for studying microbial cellulose utilization is considered relative to quantification of cells and enzymes in the presence of solid substrates as well as apparatus and analysis for cellulose-grown continuous cultures. Quantitative description of cellulose hydrolysis is addressed with respect to adsorption of cellulase enzymes, rates of enzymatic hydrolysis, bioenergetics of microbial cellulose utilization, kinetics of microbial cellulose utilization, and contrasting features compared to soluble substrate kinetics. A biological perspective on processing cellulosic biomass is presented, including features of pretreated substrates and alternative process configurations. Organism development is considered for "consolidated bioprocessing" (CBP), in which the production of cellulolytic enzymes, hydrolysis of biomass, and fermentation of resulting sugars to desired products occur in one step. Two organism development strategies for CBP are examined: (i) improve product yield and tolerance in microorganisms able to utilize cellulose, or (ii) express a heterologous system for cellulose hydrolysis and utilization in microorganisms that exhibit high product yield and tolerance. A concluding discussion identifies unresolved issues pertaining to microbial cellulose utilization, suggests approaches by which such issues might be resolved, and contrasts a microbially oriented cellulose hydrolysis paradigm to the more conventional enzymatically oriented paradigm in both fundamental and applied contexts.

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Year:  2002        PMID: 12209002      PMCID: PMC120791          DOI: 10.1128/MMBR.66.3.506-577.2002

Source DB:  PubMed          Journal:  Microbiol Mol Biol Rev        ISSN: 1092-2172            Impact factor:   11.056


  475 in total

1.  Optimized mixtures of recombinant Humicola insolens cellulases for the biodegradation of crystalline cellulose.

Authors:  C Boisset; C Pétrequin; H Chanzy; B Henrissat; M Schülein
Journal:  Biotechnol Bioeng       Date:  2001-02-05       Impact factor: 4.530

Review 2.  Foreign gene expression in yeast: a review.

Authors:  M A Romanos; C A Scorer; J J Clare
Journal:  Yeast       Date:  1992-06       Impact factor: 3.239

3.  Three-dimensional structure of cellobiohydrolase II from Trichoderma reesei.

Authors:  J Rouvinen; T Bergfors; T Teeri; J K Knowles; T A Jones
Journal:  Science       Date:  1990-07-27       Impact factor: 47.728

4.  Competition for cellulose among three predominant ruminal cellulolytic bacteria under substrate-excess and substrate-limited conditions.

Authors:  Y Shi; C L Odt; P J Weimer
Journal:  Appl Environ Microbiol       Date:  1997-02       Impact factor: 4.792

5.  Production of cellulases by Trichoderma reesei QM 9414 in fed-batch and continuous-flow culture with cell recycle.

Authors:  T K Ghose; V Sahai
Journal:  Biotechnol Bioeng       Date:  1979-02       Impact factor: 4.530

6.  Sequence and transcription of the beta-glucosidase gene of Kluyveromyces fragilis cloned in Saccharomyces cerevisiae.

Authors:  A Raynal; C Gerbaud; M C Francingues; M Guerineau
Journal:  Curr Genet       Date:  1987       Impact factor: 3.886

7.  Development of ethanol tolerance in Clostridium thermocellum: effect of growth temperature.

Authors:  A A Herrero; R F Gomez
Journal:  Appl Environ Microbiol       Date:  1980-09       Impact factor: 4.792

8.  Electrotransformation studies in Clostridium cellulolyticum.

Authors:  C Tardif; H Maamar; M Balfin; J P Belaich
Journal:  J Ind Microbiol Biotechnol       Date:  2001-11       Impact factor: 3.346

9.  Ethanol production from cellobiose, amorphous cellulose, and crystalline cellulose by recombinant Klebsiella oxytoca containing chromosomally integrated Zymomonas mobilis genes for ethanol production and plasmids expressing thermostable cellulase genes from Clostridium thermocellum.

Authors:  B E Wood; L O Ingram
Journal:  Appl Environ Microbiol       Date:  1992-07       Impact factor: 4.792

10.  Characterization of endoglucanase A from Clostridium cellulolyticum.

Authors:  H P Fierobe; C Gaudin; A Belaich; M Loutfi; E Faure; C Bagnara; D Baty; J P Belaich
Journal:  J Bacteriol       Date:  1991-12       Impact factor: 3.490

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  778 in total

1.  Enhanced soluble expression of a thermostable cellulase from Clostridium thermocellum in Escherichia coli.

Authors:  Jingjing Peng; Weiwei Wang; Yuyao Jiang; Mingjie Liu; Hui Zhang; Weilan Shao
Journal:  Curr Microbiol       Date:  2011-09-22       Impact factor: 2.188

2.  Phylogenetic, microbiological, and glycoside hydrolase diversities within the extremely thermophilic, plant biomass-degrading genus Caldicellulosiruptor.

Authors:  Sara E Blumer-Schuette; Derrick L Lewis; Robert M Kelly
Journal:  Appl Environ Microbiol       Date:  2010-10-22       Impact factor: 4.792

Review 3.  Cellulosomes from mesophilic bacteria.

Authors:  Roy H Doi; Akihiko Kosugi; Koichiro Murashima; Yutaka Tamaru; Sung Ok Han
Journal:  J Bacteriol       Date:  2003-10       Impact factor: 3.490

4.  Prospecting for novel biocatalysts in a soil metagenome.

Authors:  S Voget; C Leggewie; A Uesbeck; C Raasch; K-E Jaeger; W R Streit
Journal:  Appl Environ Microbiol       Date:  2003-10       Impact factor: 4.792

5.  Modeling microbial dynamics in heterogeneous environments: growth on soil carbon sources.

Authors:  Haluk Resat; Vanessa Bailey; Lee Ann McCue; Allan Konopka
Journal:  Microb Ecol       Date:  2011-12-23       Impact factor: 4.552

6.  Kinetic modeling of rapid enzymatic hydrolysis of crystalline cellulose after pretreatment by NMMO.

Authors:  Mahdi Khodaverdi; Azam Jeihanipour; Keikhosro Karimi; Mohammad J Taherzadeh
Journal:  J Ind Microbiol Biotechnol       Date:  2011-11-04       Impact factor: 3.346

7.  Identification of cellulose-responsive bacterial and fungal communities in geographically and edaphically different soils by using stable isotope probing.

Authors:  Stephanie A Eichorst; Cheryl R Kuske
Journal:  Appl Environ Microbiol       Date:  2012-01-27       Impact factor: 4.792

8.  Heterologous expression in Pichia pastoris and characterization of an endogenous thermostable and high-glucose-tolerant β-glucosidase from the termite Nasutitermes takasagoensis.

Authors:  Cristiane Akemi Uchima; Gaku Tokuda; Hirofumi Watanabe; Katsuhiko Kitamoto; Manabu Arioka
Journal:  Appl Environ Microbiol       Date:  2012-04-20       Impact factor: 4.792

9.  Next-generation cellulosic ethanol technologies and their contribution to a sustainable Africa.

Authors:  W H van Zyl; A F A Chimphango; R den Haan; J F Görgens; P W C Chirwa
Journal:  Interface Focus       Date:  2011-02-09       Impact factor: 3.906

10.  Purification and characterization of an organic-solvent-tolerant cellulase from a halotolerant isolate, Bacillus sp. L1.

Authors:  Xin Li; Hui-Ying Yu
Journal:  J Ind Microbiol Biotechnol       Date:  2012-03-22       Impact factor: 3.346

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