Literature DB >> 12570873

Calcium and domain interactions contribute to the thermostability of domains of the multimodular cellobiohydrolase, CbhA, a subunit of the Clostridium thermocellum cellulosome.

Irina A Kataeva1, Vladimir N Uversky, Lars G Ljungdahl.   

Abstract

Each of three internal domains of multi-modular cellobiohydrolase CbhA from Clostridium thermocellum, X1(1), X1(2) (previously designated as fibronectin type 3-like modules, Fn3(1) and Fn3(2)) and family 3 carbohydrate-binding module (CBM3) binds 1 mol of Ca(2+). Structures and thermal stabilities of X1(1), X1(2), CBM3, X1(1)X1(2), and X1(1)X1(2)-CBM3 containing Ca(2+) (holo-proteins) and without Ca(2+) (apo-proteins) have been studied using CD spectroscopy. All domains are beta-proteins with irregular far-UV CD spectra due to the aromatic side chain contributions. The positive signal at 294 nm in the near-UV CD spectrum of X1(1) lacking a tryptophan residue might be attributed to the presence of aromatic clusters. Thermal denaturation of all proteins is reversible and results in the total loss of tertiary structure and preservation of significant amount of ordered secondary structure. Removal of Ca(2+) destabilizes polypeptides in a different way and to a different extent. It decreases the melting temperature ( T (m)) (by 20 degrees C) and co-operativity of thermal transition of X1(1), increases the number of transitions and lowers the co-operativity of unfolding of CBM3, and slightly decreases T (m)s (2.4-4.2 degrees C) of X1(2), X1(1)X1(2), and X1(1)X1(2)-CBM3. Transitions of X1(1)X1(2) and X1(1)X1(2)-CBM3 follow a two-state model regardless of the presence of Ca(2+). X1(1) is strongly stabilized in the apo-X1(1)X1(2) and apo-X1(1)X1(2)-CBM3 as they display T (m)s similar to those of individual and combined holo-modules. Observed CD spectra of X1(1)X1(2) and X1(1)X1(2)-CBM3 differ from those calculated as the simple weighted sum of individual modules. These differences are more prominent in spectra of apo-proteins. The results indicate the presence of inter-domain interactions in CbhA. Holo-modules, i.e. containing Ca(2+), behave essentially independently, but in the absence of Ca(2+) domain interactions are more important for the conformation of the polypeptides.

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Year:  2003        PMID: 12570873      PMCID: PMC1223363          DOI: 10.1042/BJ20021621

Source DB:  PubMed          Journal:  Biochem J        ISSN: 0264-6021            Impact factor:   3.857


  31 in total

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Review 2.  Stability and folding of domain proteins.

Authors:  R Jaenicke
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3.  Structural and functional similarity between Yersinia pestis capsular protein Caf1 and human interleukin-1 beta.

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Journal:  Biochemistry       Date:  2001-05-22       Impact factor: 3.162

4.  Multidomain structure and cellulosomal localization of the Clostridium thermocellum cellobiohydrolase CbhA.

Authors:  V V Zverlov; G V Velikodvorskaya; W H Schwarz; K Bronnenmeier; J Kellermann; W L Staudenbauer
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5.  Kinetic stabilisation of a modular protein by domain interactions.

Authors:  M Wenk; R Jaenicke; E M Mayr
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Authors:  P E Johnson; A L Creagh; E Brun; K Joe; P Tomme; C A Haynes; L P McIntosh
Journal:  Biochemistry       Date:  1998-09-15       Impact factor: 3.162

8.  Secondary structure and calcium-induced folding of the Clostridium thermocellum dockerin domain determined by NMR spectroscopy.

Authors:  B L Lytle; B F Volkman; W M Westler; J H Wu
Journal:  Arch Biochem Biophys       Date:  2000-07-15       Impact factor: 4.013

9.  Cloning and sequence analysis of a new cellulase gene encoding CelK, a major cellulosome component of Clostridium thermocellum: evidence for gene duplication and recombination.

Authors:  I Kataeva; X L Li; H Chen; S K Choi; L G Ljungdahl
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Authors:  I A Kataeva; D L Blum; X L Li; L G Ljungdahl
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  6 in total

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Journal:  J Phys Chem B       Date:  2016-11-11       Impact factor: 2.991

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  6 in total

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