Literature DB >> 3550418

Effects on mRNA splicing of mutations in the 3' region of the Saccharomyces cerevisiae actin intron.

L A Fouser, J D Friesen.   

Abstract

Point mutations, deletions, and a sequence context change were introduced at positions 3' to the internal conserved TACTAAC sequence of the Saccharomyces cerevisiae actin intron. In vivo analysis of yeast mRNA splicing suggests that, in contrast to the importance of the polypyrimidine tract in metazoan introns, specific sequences in this region are not required for efficient excision of a yeast intron. However, a double point mutation near the 3' junction (GG/AC) does severely inhibit splicing. Although this mutagenesis of the 3' junction, as well as deletion of most nucleotides between the TACTAAC and the 3' junction, caused only a slight accumulation of primary transcript, the observed accumulation of lariat intermediate by these mutants demonstrates the significance of this region for a step(s) in the splicing process after lariat formation.

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Year:  1987        PMID: 3550418      PMCID: PMC365060          DOI: 10.1128/mcb.7.1.225-230.1987

Source DB:  PubMed          Journal:  Mol Cell Biol        ISSN: 0270-7306            Impact factor:   4.272


  37 in total

1.  Excision of an intact intron as a novel lariat structure during pre-mRNA splicing in vitro.

Authors:  B Ruskin; A R Krainer; T Maniatis; M R Green
Journal:  Cell       Date:  1984-08       Impact factor: 41.582

2.  Evidence for the biochemical role of an internal sequence in yeast nuclear mRNA introns: implications for U1 RNA and metazoan mRNA splicing.

Authors:  C W Pikielny; J L Teem; M Rosbash
Journal:  Cell       Date:  1983-09       Impact factor: 41.582

3.  Lariat RNA's as intermediates and products in the splicing of messenger RNA precursors.

Authors:  R A Padgett; M M Konarska; P J Grabowski; S F Hardy; P A Sharp
Journal:  Science       Date:  1984-08-31       Impact factor: 47.728

Review 4.  Organization and expression of eucaryotic split genes coding for proteins.

Authors:  R Breathnach; P Chambon
Journal:  Annu Rev Biochem       Date:  1981       Impact factor: 23.643

5.  Analysis of gene control signals by DNA fusion and cloning in Escherichia coli.

Authors:  M J Casadaban; S N Cohen
Journal:  J Mol Biol       Date:  1980-04       Impact factor: 5.469

6.  Activation of a cryptic TACTAAC box in the Saccharomyces cerevisiae actin intron.

Authors:  A Cellini; R Parker; J McMahon; C Guthrie; J Rossi
Journal:  Mol Cell Biol       Date:  1986-05       Impact factor: 4.272

7.  Construction of a yeast actin gene intron deletion mutant that is defective in splicing and leads to the accumulation of precursor RNA in transformed yeast cells.

Authors:  D Gallwitz
Journal:  Proc Natl Acad Sci U S A       Date:  1982-06       Impact factor: 11.205

8.  Point mutations identify the conserved, intron-contained TACTAAC box as an essential splicing signal sequence in yeast.

Authors:  C J Langford; F J Klinz; C Donath; D Gallwitz
Journal:  Cell       Date:  1984-03       Impact factor: 41.582

9.  Expression of the Herpes simplex virus thymidine kinase gene in Saccharomyces cerevisiae.

Authors:  J B McNeil; J D Friesen
Journal:  Mol Gen Genet       Date:  1981

10.  Evidence for an intron-contained sequence required for the splicing of yeast RNA polymerase II transcripts.

Authors:  C J Langford; D Gallwitz
Journal:  Cell       Date:  1983-06       Impact factor: 41.582

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  19 in total

1.  Genetic interactions between the 5' and 3' splice site consensus sequences and U6 snRNA during the second catalytic step of pre-mRNA splicing.

Authors:  C A Collins; C Guthrie
Journal:  RNA       Date:  2001-12       Impact factor: 4.942

2.  Alternative modes of mRNA processing in a 3' splice site mutant of Neurospora crassa.

Authors:  J H Kinnaird; D F Revell; I F Connerton; I Hasleham; J R Fincham
Journal:  Curr Genet       Date:  1992-07       Impact factor: 3.886

3.  Large-scale comparative analysis of splicing signals and their corresponding splicing factors in eukaryotes.

Authors:  Schraga H Schwartz; João Silva; David Burstein; Tal Pupko; Eduardo Eyras; Gil Ast
Journal:  Genome Res       Date:  2007-11-21       Impact factor: 9.043

4.  Impairment of yeast pre-mRNA splicing by potential secondary structure-forming sequences near the conserved branchpoint sequence.

Authors:  H Halfter; D Gallwitz
Journal:  Nucleic Acids Res       Date:  1988-11-25       Impact factor: 16.971

5.  In vivo commitment to splicing in yeast involves the nucleotide upstream from the branch site conserved sequence and the Mud2 protein.

Authors:  J C Rain; P Legrain
Journal:  EMBO J       Date:  1997-04-01       Impact factor: 11.598

6.  Exon ligation is proofread by the DExD/H-box ATPase Prp22p.

Authors:  Rabiah M Mayas; Hiroshi Maita; Jonathan P Staley
Journal:  Nat Struct Mol Biol       Date:  2006-05-07       Impact factor: 15.369

7.  Role of intron splicing in the function of the MATa1 gene of Saccharomyces cerevisiae.

Authors:  S S Ner; M Smith
Journal:  Mol Cell Biol       Date:  1989-11       Impact factor: 4.272

8.  Nuclear pre-mRNA introns: analysis and comparison of intron sequences from Tetrahymena thermophila and other eukaryotes.

Authors:  C Csank; F M Taylor; D W Martindale
Journal:  Nucleic Acids Res       Date:  1990-09-11       Impact factor: 16.971

9.  Formation of the yeast splicing complex A1 and association of the splicing factor PRP19 with the pre-mRNA are independent of the 3' region of the intron.

Authors:  S C Cheng
Journal:  Nucleic Acids Res       Date:  1994-05-11       Impact factor: 16.971

10.  Splicing removes the Caenorhabditis elegans transposon Tc1 from most mutant pre-mRNAs.

Authors:  A M Rushforth; P Anderson
Journal:  Mol Cell Biol       Date:  1996-01       Impact factor: 4.272

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