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Literature DB >> 9081240

Evaluation of new primers for CSF1PO.

K Yoshida¹, K Sekiguchi, K Kasai, H Sato, S Seta, G F Sensabaugh.

Abstract

We describe new primers for the detection of the STR polymorphism at the CSF1PO locus. These primers have been designed to produce shorter amplicons (150-182 bp) than the primers in standard use (295-327 bp). The reliability of the new primers for CSF1PO typing has been demonstrated by testing on known samples and by sequence analysis. These primers are superior to the original primers with regard to electrophoretic resolution and utility for typing of severely degraded DNA.

Mesh：

Substances：

Year: 1997 PMID： 9081240 DOI： 10.1007/bf02441025

Source DB: PubMed Journal: Int J Legal Med ISSN： 0937-9827 Impact factor: 2.686

14 in total

1. Short tandem repeat typing of bodies from a mass disaster: high success rate and characteristic amplification patterns in highly degraded samples.

Authors: J P Whitaker; T M Clayton; A J Urquhart; E S Millican; T J Downes; C P Kimpton; P Gill
Journal: Biotechniques Date: 1995-04 Impact factor: 1.993

2. Novel non-templated nucleotide addition reactions catalyzed by procaryotic and eucaryotic DNA polymerases.

Authors: J M Clark
Journal: Nucleic Acids Res Date: 1988-10-25 Impact factor: 16.971

3. Swiss population data and forensic efficiency values on 3 tetrameric short tandem repeat loci-HUMTH01, TPOX, and CSF1PO-derived using a STR multiplex system.

Authors: M N Hochmeister; B Budowle; J W Schumm; C J Sprecher; U V Borer; R Dirnhofer
Journal: Int J Legal Med Date: 1995 Impact factor: 2.686

4. Automated DNA profiling employing multiplex amplification of short tandem repeat loci.

Authors: C P Kimpton; P Gill; A Walton; A Urquhart; E S Millican; M Adams
Journal: PCR Methods Appl Date: 1993-08

5. Identification of the remains of the Romanov family by DNA analysis.

Authors: P Gill; P L Ivanov; C Kimpton; R Piercy; N Benson; G Tully; I Evett; E Hagelberg; K Sullivan
Journal: Nat Genet Date: 1994-02 Impact factor: 38.330

6. The validation of short tandem repeat (STR) loci for use in forensic casework.

Authors: J E Lygo; P E Johnson; D J Holdaway; S Woodroffe; J P Whitaker; T M Clayton; C P Kimpton; P Gill
Journal: Int J Legal Med Date: 1994 Impact factor: 2.686

7. Evaluation of 13 short tandem repeat loci for use in personal identification applications.

Authors: H A Hammond; L Jin; Y Zhong; C T Caskey; R Chakraborty
Journal: Am J Hum Genet Date: 1994-07 Impact factor: 11.025

8. Identification of repeat sequence heterogeneity at the polymorphic short tandem repeat locus HUMTH01[AATG]n and reassignment of alleles in population analysis by using a locus-specific allelic ladder.

Authors: C Puers; H A Hammond; L Jin; C T Caskey; J W Schumm
Journal: Am J Hum Genet Date: 1993-10 Impact factor: 11.025

Evaluation of new primers for CSF1PO.

1. Short tandem repeat typing of bodies from a mass disaster: high success rate and characteristic amplification patterns in highly degraded samples.

2. Novel non-templated nucleotide addition reactions catalyzed by procaryotic and eucaryotic DNA polymerases.

3. Swiss population data and forensic efficiency values on 3 tetrameric short tandem repeat loci-HUMTH01, TPOX, and CSF1PO-derived using a STR multiplex system.

4. Automated DNA profiling employing multiplex amplification of short tandem repeat loci.

5. Identification of the remains of the Romanov family by DNA analysis.

6. The validation of short tandem repeat (STR) loci for use in forensic casework.

7. Evaluation of 13 short tandem repeat loci for use in personal identification applications.

8. Identification of repeat sequence heterogeneity at the polymorphic short tandem repeat locus HUMTH01[AATG]n and reassignment of alleles in population analysis by using a locus-specific allelic ladder.

9. Rapid and efficient resolution of parentage by amplification of short tandem repeats.

10. Confirmation of the identity of human skeletal remains using Multiplex PCR Amplification and Typing Kits.

1. A new "miniSTR-multiplex" displaying reduced amplicon lengths for the analysis of degraded DNA.

2. Y-STR analysis of degraded DNA using reduced-size amplicons.

3. Evaluation of miniY-STR multiplex PCR systems for extended 16 Y-STR loci.

4. New sensitive amplification primers for the STR locus D2S1338 for degraded casework DNA.

5. False homozygosities at CSF1PO loci revealed by discrepancies between two kits in Chinese population.