Literature DB >> 12799739

New sensitive amplification primers for the STR locus D2S1338 for degraded casework DNA.

P Grubwieser1, R Mühlmann, W Parson.   

Abstract

PCR primers for the locus D2S1338 were redesigned in order to reduce the length of the amplification product compared with the conventional design. The new amplification primers were applied to highly degraded casework samples, which gave no or only weak results for D2 in previous analyses. The application of the new primers resulted in an increased overall typing success rate. In a concordance study between the conventional and the newly designed primers, no genotype differences were revealed in 503 randomly selected individuals. This suggests robust amplification conditions with respect to mutation-based allele drop-out.

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Year:  2003        PMID: 12799739     DOI: 10.1007/s00414-002-0359-y

Source DB:  PubMed          Journal:  Int J Legal Med        ISSN: 0937-9827            Impact factor:   2.686


  17 in total

1.  Improved MtDNA sequence analysis of forensic remains using a "mini-primer set" amplification strategy.

Authors:  M N Gabriel; E F Huffine; J H Ryan; M M Holland; T J Parsons
Journal:  J Forensic Sci       Date:  2001-03       Impact factor: 1.832

2.  Less is more--length reduction of STR amplicons using redesigned primers.

Authors:  P Wiegand; M Kleiber
Journal:  Int J Legal Med       Date:  2001       Impact factor: 2.686

3.  STR typing of human telogen hairs--a new approach.

Authors:  A Hellmann; U Rohleder; H Schmitter; M Wittig
Journal:  Int J Legal Med       Date:  2001       Impact factor: 2.686

4.  When autosomal short tandem repeats fail: optimized primer and reaction design for Y-chromosome short tandem repeat analysis in forensic casework.

Authors:  W Parson; H Niederstätter; S Köchl; M Steinlechner; B Berger
Journal:  Croat Med J       Date:  2001-06       Impact factor: 1.351

5.  Criminal DNA databases: the European situation.

Authors:  P M Schneider; P D Martin
Journal:  Forensic Sci Int       Date:  2001-06-15       Impact factor: 2.395

6.  Study on the STR TPOX in an Italian and an Austrian population using two different primer pairs and three different electrophoretic methods.

Authors:  U Ricci; M Klintschar; F Neuhuber; M L Giovannucci Uzielli
Journal:  Int J Legal Med       Date:  1998       Impact factor: 2.686

7.  Reliable genotyping of short tandem repeat loci without an allelic ladder using time-of-flight mass spectrometry.

Authors:  J M Butler; J Li; T A Shaler; J A Monforte; C H Becker
Journal:  Int J Legal Med       Date:  1998       Impact factor: 2.686

8.  Evaluation of new primers for CSF1PO.

Authors:  K Yoshida; K Sekiguchi; K Kasai; H Sato; S Seta; G F Sensabaugh
Journal:  Int J Legal Med       Date:  1997       Impact factor: 2.686

9.  Additional primer sets for an amelogenin gene PCR-based DNA-sex test.

Authors:  H Haas-Rochholz; G Weiler
Journal:  Int J Legal Med       Date:  1997       Impact factor: 2.686

10.  Typing Y chromosome STR haplotypes using redesigned primers.

Authors:  Yiping Hou; Ji Zhang; Dahong Sun; Yinbi Li; Jin Wu; Sizhong Zhang; Mechthild Prinz
Journal:  J Forensic Sci       Date:  2002-01       Impact factor: 1.832

View more
  5 in total

1.  Development of a 13-locus PCR multiplex system for paternity testing.

Authors:  J Schlenk; S Seidl; G Braunschweiger; P Betz; T Lederer
Journal:  Int J Legal Med       Date:  2004-01-14       Impact factor: 2.686

2.  Characterisation of variant alleles in the STR systems D2S1338, D3S1358 and D19S433.

Authors:  Marielle Heinrich; Heike Felske-Zech; Bernd Brinkmann; Carsten Hohoff
Journal:  Int J Legal Med       Date:  2005-06-18       Impact factor: 2.686

3.  A new "miniSTR-multiplex" displaying reduced amplicon lengths for the analysis of degraded DNA.

Authors:  P Grubwieser; R Mühlmann; B Berger; H Niederstätter; M Pavlic; W Parson
Journal:  Int J Legal Med       Date:  2005-07-13       Impact factor: 2.686

4.  'Mitominis': multiplex PCR analysis of reduced size amplicons for compound sequence analysis of the entire mtDNA control region in highly degraded samples.

Authors:  Cordula Eichmann; Walther Parson
Journal:  Int J Legal Med       Date:  2008-03-28       Impact factor: 2.686

5.  DNA capture and next-generation sequencing can recover whole mitochondrial genomes from highly degraded samples for human identification.

Authors:  Jennifer E L Templeton; Paul M Brotherton; Bastien Llamas; Julien Soubrier; Wolfgang Haak; Alan Cooper; Jeremy J Austin
Journal:  Investig Genet       Date:  2013-12-02
  5 in total

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