Literature DB >> 2460825

Novel non-templated nucleotide addition reactions catalyzed by procaryotic and eucaryotic DNA polymerases.

J M Clark1.   

Abstract

DNA polymerases catalyze the addition of deoxyribonucleotides onto DNA primers in a template-directed manner. The requirement for template instruction distinguishes these enzymes from other nucleotidyl transferases, such as terminal deoxynucleotidyl transferase, that do not utilize a template. An oligonucleotide substrate was used to characterize a novel, non-templated nucleotide addition reaction carried out by DNA polymerases from a variety of procaryotic and eucaryotic sources. The products of the reaction, in which a deoxyribonucleotide was added to the 3' hydroxyl terminus of a blunt-ended DNA substrate, were analyzed by electrophoresis on high resolution, denaturing polyacrylamide gels. DNA polymerase from Thermus aquaticus, polymerase alpha from chick embryo, rat polymerase beta, reverse transcriptase from avian myeloblastosis virus, and DNA polymerase I from Saccharomyces cerevisiae all carried out the blunt-end addition reaction. The reaction required a duplex DNA substrate but did not require coding information from the template strand. These results demonstrate that template instruction is not an absolute requirement for the catalysis of nucleotidyl transfer reactions by DNA polymerases.

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Year:  1988        PMID: 2460825      PMCID: PMC338772          DOI: 10.1093/nar/16.20.9677

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  22 in total

Review 1.  Yeast telomeres: the end of the chromosome story?

Authors:  R M Walmsley
Journal:  Yeast       Date:  1987-09       Impact factor: 3.239

2.  Comparative rates of spontaneous mutation.

Authors:  J W Drake
Journal:  Nature       Date:  1969-03-22       Impact factor: 49.962

Review 3.  Bacterial mutator genes and the control of spontaneous mutation.

Authors:  E C Cox
Journal:  Annu Rev Genet       Date:  1976       Impact factor: 16.830

Review 4.  Fidelity of DNA synthesis.

Authors:  L A Loeb; T A Kunkel
Journal:  Annu Rev Biochem       Date:  1982       Impact factor: 23.643

Review 5.  The molecular structure of centromeres and telomeres.

Authors:  E H Blackburn
Journal:  Annu Rev Biochem       Date:  1984       Impact factor: 23.643

6.  Joining of immunoglobulin heavy chain gene segments: implications from a chromosome with evidence of three D-JH fusions.

Authors:  F W Alt; D Baltimore
Journal:  Proc Natl Acad Sci U S A       Date:  1982-07       Impact factor: 11.205

7.  DNA polymerases from bakers' yeast.

Authors:  L M Chang
Journal:  J Biol Chem       Date:  1977-03-25       Impact factor: 5.157

8.  Chick embryo DNA polymerase alpha. Polypeptide components and their microheterogeneity.

Authors:  M Yamaguchi; K Tanabe; T Takahashi; A Matsukage
Journal:  J Biol Chem       Date:  1982-04-25       Impact factor: 5.157

9.  Depurination-induced infidelity of deoxyribonucleic acid synthesis with purified deoxyribonucleic acid replication proteins in vitro.

Authors:  T A Kunkel; R M Schaaper; L A Loeb
Journal:  Biochemistry       Date:  1983-05-10       Impact factor: 3.162

10.  Insertion of nucleotides opposite apurinic/apyrimidinic sites in deoxyribonucleic acid during in vitro synthesis: uniqueness of adenine nucleotides.

Authors:  D Sagher; B Strauss
Journal:  Biochemistry       Date:  1983-09-13       Impact factor: 3.162

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  218 in total

1.  Enhancing the catalytic repertoire of nucleic acids: a systematic study of linker length and rigidity.

Authors:  S E Lee; A Sidorov; T Gourlain; N Mignet; S J Thorpe; J A Brazier; M J Dickman; D P Hornby; J A Grasby; D M Williams
Journal:  Nucleic Acids Res       Date:  2001-04-01       Impact factor: 16.971

2.  DNA strand transfer catalyzed by vaccinia topoisomerase: ligation of DNAs containing a 3' mononucleotide overhang.

Authors:  C Cheng; S Shuman
Journal:  Nucleic Acids Res       Date:  2000-05-01       Impact factor: 16.971

3.  Mass spectrometry of single-stranded restriction fragments captured by an undigested complementary sequence.

Authors:  N H Chiu; K Tang; P Yip; A Braun; H Koster; C R Cantor
Journal:  Nucleic Acids Res       Date:  2000-04-15       Impact factor: 16.971

4.  Poliovirus requires a precise 5' end for efficient positive-strand RNA synthesis.

Authors:  J Herold; R Andino
Journal:  J Virol       Date:  2000-07       Impact factor: 5.103

5.  DNA double-strand break repair in cell-free extracts from Ku80-deficient cells: implications for Ku serving as an alignment factor in non-homologous DNA end joining.

Authors:  E Feldmann; V Schmiemann; W Goedecke; S Reichenberger; P Pfeiffer
Journal:  Nucleic Acids Res       Date:  2000-07-01       Impact factor: 16.971

6.  The effect of chromatin structure on cisplatin damage in intact human cells.

Authors:  N P Davies; L C Hardman; V Murray
Journal:  Nucleic Acids Res       Date:  2000-08-01       Impact factor: 16.971

7.  Ordered catenation of sequence-tagged sites and multiplexed SNP genotyping by sequencing.

Authors:  Koichiro Higasa; Kenshi Hayashi
Journal:  Nucleic Acids Res       Date:  2002-02-01       Impact factor: 16.971

8.  DNA sequences from multiple amplifications reveal artifacts induced by cytosine deamination in ancient DNA.

Authors:  M Hofreiter; V Jaenicke; D Serre; A von Haeseler; S Pääbo
Journal:  Nucleic Acids Res       Date:  2001-12-01       Impact factor: 16.971

Review 9.  Survey and summary: The applications of universal DNA base analogues.

Authors:  D Loakes
Journal:  Nucleic Acids Res       Date:  2001-06-15       Impact factor: 16.971

10.  Octamer-primed sequencing technology: effects of dNTP supplementation.

Authors:  A I Kraltcheva; S H Hardin
Journal:  Nucleic Acids Res       Date:  2001-05-15       Impact factor: 16.971

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