Literature DB >> 7819123

The validation of short tandem repeat (STR) loci for use in forensic casework.

J E Lygo1, P E Johnson, D J Holdaway, S Woodroffe, J P Whitaker, T M Clayton, C P Kimpton, P Gill.   

Abstract

A quadruplex reaction has been developed which amplifies the short tandem repeat (STR) loci HUM-VWA31/A, HUMTHO1, HUMF13A1 and HUMFES/FPS. Detection of the PCR products employs denaturing polyacrylamide gels coupled with fluorescent-based technology. This system has been evaluated for use in routine forensic casework and has been shown to be both robust and reproducible. The quadruplex reaction is as sensitive as the commercially available HLA DQ alpha Amplitype typing system and can be used on both degraded and aged material. The problems of environmental contamination have been shown to be limited provided strict procedural practices are followed-i.e. physical separation of sample extraction and amplified products; the use of dedicated equipment such as pipettes; the separation of amplification preparation area. The ability of the system to detect mixtures and the successful analysis of case stains has shown that this system is well suited as a tool for forensic investigation.

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Year:  1994        PMID: 7819123     DOI: 10.1007/bf01225493

Source DB:  PubMed          Journal:  Int J Legal Med        ISSN: 0937-9827            Impact factor:   2.686


  27 in total

1.  Identification of the skeletal remains of Josef Mengele by DNA analysis.

Authors:  A J Jeffreys; M J Allen; E Hagelberg; A Sonnberg
Journal:  Forensic Sci Int       Date:  1992-09       Impact factor: 2.395

2.  A rapid chemiluminescent method for quantitation of human DNA.

Authors:  P S Walsh; J Varlaro; R Reynolds
Journal:  Nucleic Acids Res       Date:  1992-10-11       Impact factor: 16.971

3.  Automated DNA profiling by fluorescent labeling of PCR products.

Authors:  K M Sullivan; S Pope; P Gill; J M Robertson
Journal:  PCR Methods Appl       Date:  1992-08

4.  Tetranucleotide repeat polymorphism at the human coagulation factor XIII A subunit gene (F13A1).

Authors:  M H Polymeropoulos; D S Rath; H Xiao; C R Merril
Journal:  Nucleic Acids Res       Date:  1991-08-11       Impact factor: 16.971

5.  The distribution and significance of amylase-containing stains on clothing.

Authors:  C Rushton; A Kipps; V Quarmby; P H Whitehead
Journal:  J Forensic Sci Soc       Date:  1979-01

6.  Automated DNA profiling employing multiplex amplification of short tandem repeat loci.

Authors:  C P Kimpton; P Gill; A Walton; A Urquhart; E S Millican; M Adams
Journal:  PCR Methods Appl       Date:  1993-08

7.  Identification of repeat sequence heterogeneity at the polymorphic short tandem repeat locus HUMTH01[AATG]n and reassignment of alleles in population analysis by using a locus-specific allelic ladder.

Authors:  C Puers; H A Hammond; L Jin; C T Caskey; J W Schumm
Journal:  Am J Hum Genet       Date:  1993-10       Impact factor: 11.025

8.  Evaluation of an automated DNA profiling system employing multiplex amplification of four tetrameric STR loci.

Authors:  C Kimpton; D Fisher; S Watson; M Adams; A Urquhart; J Lygo; P Gill
Journal:  Int J Legal Med       Date:  1994       Impact factor: 2.686

9.  Variation in short tandem repeat sequences--a survey of twelve microsatellite loci for use as forensic identification markers.

Authors:  A Urquhart; C P Kimpton; T J Downes; P Gill
Journal:  Int J Legal Med       Date:  1994       Impact factor: 2.686

10.  Multiplex PCR amplification of three microsatellites within the CFTR gene.

Authors:  N Morral; X Estivill
Journal:  Genomics       Date:  1992-08       Impact factor: 5.736

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  29 in total

1.  Preimplantation genetic diagnosis using fluorescent polymerase chain reaction: results and future developments.

Authors:  I Findlay; P Matthews; P Quirke
Journal:  J Assist Reprod Genet       Date:  1999-04       Impact factor: 3.412

2.  Variation at 16 STR loci in Rwandans (Hutu) and implications on profile frequency estimation in Bantu-speakers.

Authors:  Sergio Tofanelli; Ilaria Boschi; Stefania Bertoneri; Valentina Coia; Luca Taglioli; Marcello Giovanni Franceschi; Giovanni Destro-Bisol; Vincenzo Pascali; Giorgio Paoli
Journal:  Int J Legal Med       Date:  2003-02-15       Impact factor: 2.686

3.  Detection and quantification of in vitro-culture induced chimerism using simple sequence repeat (SSR) analysis in Theobroma cacao (L.).

Authors:  Carlos M Rodríguez López; Andrew C Wetten; Michael J Wilkinson
Journal:  Theor Appl Genet       Date:  2004-10-23       Impact factor: 5.699

4.  Low-volume amplification on chemically structured chips using the PowerPlex16 DNA amplification kit.

Authors:  Ulrike Schmidt; Sabine Lutz-Bonengel; Hans-Joachim Weisser; Timo Sänger; Stefan Pollak; Ulrike Schön; Thomas Zacher; Wolfgang Mann
Journal:  Int J Legal Med       Date:  2005-10-18       Impact factor: 2.686

5.  Low volume amplification and sequencing of mitochondrial DNA on a chemically structured chip.

Authors:  Sabine Lutz-Bonengel; Timo Sänger; Marielle Heinrich; Ulrike Schön; Ulrike Schmidt
Journal:  Int J Legal Med       Date:  2006-11-09       Impact factor: 2.686

6.  Structural variation in the alleles of a short tandem repeat system at the human alpha fibrinogen locus.

Authors:  M D Barber; B J McKeown; B H Parkin
Journal:  Int J Legal Med       Date:  1996       Impact factor: 2.686

7.  Analysis of a short tandem repeat locus on chromosome 19 (D19S253).

Authors:  F De Stefano; L Casarino; M G Costa; G Bruni; A Mannucci; M Unseld; R Hiesel; M Canale
Journal:  Int J Legal Med       Date:  1996       Impact factor: 2.686

8.  A Dutch population study of the STR Loci HUMTHO1, HUMFES/FPS, HUMVWA31/1 and HUMF13A1, conducted for forensic purposes.

Authors:  M Sjerps; N van der Geest; C Pieron; M Gajadhar; A Kloosterman
Journal:  Int J Legal Med       Date:  1995       Impact factor: 2.686

9.  Validation of the STR system FES/FPS for forensic purposes in an Austrian population sample.

Authors:  M Klintschar
Journal:  Int J Legal Med       Date:  1995       Impact factor: 2.686

Review 10.  Cancer and forensic microsatellites.

Authors:  Karen Page; Eleanor A M Graham
Journal:  Forensic Sci Med Pathol       Date:  2008-02-02       Impact factor: 2.007

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