Literature DB >> 9016491

GenBank.

D A Benson1, M S Boguski, D J Lipman, J Ostell.   

Abstract

The GenBank sequence database incorporates DNA sequences from all available public sources, primarily through the direct submission of sequence data from authors and from large-scale sequencing projects. Data exchange with the EMBL Data Library and the DNA Data Bank of Japan helps ensure comprehensive coverage. GenBank continues to focus on quality control and annotation while expanding data coverage and retrieval services. An integrated retrieval system, known asEntrez, incorporates data from the major DNA and protein sequence databases, along with genome maps and protein structure information. MEDLINE abstracts from published articles describing the sequences are also included as an additional source of biological annotation. Sequence similarity searching is offered through the BLAST family of programs. All of NCBI's services are offered through the World Wide Web. In addition, there are specialized server/client versions as well as FTP and e-mail server access.

Mesh：

Year:  1997        PMID： 9016491      PMCID： PMC146400          DOI： 10.1093/nar/25.1.1

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN： 0305-1048            Impact factor:   16.971


  9 in total

Review 1.  A gene map of the human genome.

Authors:  G D Schuler; M S Boguski; E A Stewart; L D Stein; G Gyapay; K Rice; R E White; P Rodriguez-Tomé; A Aggarwal; E Bajorek; S Bentolila; B B Birren; A Butler; A B Castle; N Chiannilkulchai; A Chu; C Clee; S Cowles; P J Day; T Dibling; N Drouot; I Dunham; S Duprat; C East; C Edwards; J B Fan; N Fang; C Fizames; C Garrett; L Green; D Hadley; M Harris; P Harrison; S Brady; A Hicks; E Holloway; L Hui; S Hussain; C Louis-Dit-Sully; J Ma; A MacGilvery; C Mader; A Maratukulam; T C Matise; K B McKusick; J Morissette; A Mungall; D Muselet; H C Nusbaum; D C Page; A Peck; S Perkins; M Piercy; F Qin; J Quackenbush; S Ranby; T Reif; S Rozen; C Sanders; X She; J Silva; D K Slonim; C Soderlund; W L Sun; P Tabar; T Thangarajah; N Vega-Czarny; D Vollrath; S Voyticky; T Wilmer; X Wu; M D Adams; C Auffray; N A Walter; R Brandon; A Dehejia; P N Goodfellow; R Houlgatte; J R Hudson; S E Ide; K R Iorio; W Y Lee; N Seki; T Nagase; K Ishikawa; N Nomura; C Phillips; M H Polymeropoulos; M Sandusky; K Schmitt; R Berry; K Swanson; R Torres; J C Venter; J M Sikela; J S Beckmann; J Weissenbach; R M Myers; D R Cox; M R James; D Bentley; P Deloukas; E S Lander; T J Hudson
Journal:  Science       Date:  1996-10-25       Impact factor: 47.728

2.  Whose genome is it, anyway?

Authors:  E Marshall
Journal:  Science       Date:  1996-09-27       Impact factor: 47.728

3.  Entrez: molecular biology database and retrieval system.

Authors:  G D Schuler; J A Epstein; H Ohkawa; J A Kans
Journal:  Methods Enzymol       Date:  1996       Impact factor: 1.600

4.  Generation and analysis of 280,000 human expressed sequence tags.

Authors:  L D Hillier; G Lennon; M Becker; M F Bonaldo; B Chiapelli; S Chissoe; N Dietrich; T DuBuque; A Favello; W Gish; M Hawkins; M Hultman; T Kucaba; M Lacy; M Le; N Le; E Mardis; B Moore; M Morris; J Parsons; C Prange; L Rifkin; T Rohlfing; K Schellenberg; M Bento Soares; F Tan; J Thierry-Meg; E Trevaskis; K Underwood; P Wohldman; R Waterston; R Wilson; M Marra
Journal:  Genome Res       Date:  1996-09       Impact factor: 9.043

5.  Toward the development of a gene index to the human genome: an assessment of the nature of high-throughput EST sequence data.

Authors:  J S Aaronson; B Eckman; R A Blevins; J A Borkowski; J Myerson; S Imran; K O Elliston
Journal:  Genome Res       Date:  1996-09       Impact factor: 9.043

6.  Yeast genome sequence ferments new research.

Authors:  N Williams
Journal:  Science       Date:  1996-04-26       Impact factor: 47.728

7.  GenBank.

Authors:  D A Benson; M Boguski; D J Lipman; J Ostell
Journal:  Nucleic Acids Res       Date:  1996-01-01       Impact factor: 16.971

8.  An STS-based map of the human genome.

Authors:  T J Hudson; L D Stein; S S Gerety; J Ma; A B Castle; J Silva; D K Slonim; R Baptista; L Kruglyak; S H Xu; X Hu; A M Colbert; C Rosenberg; M P Reeve-Daly; S Rozen; L Hui; X Wu; C Vestergaard; K M Wilson; J S Bae; S Maitra; S Ganiatsas; C A Evans; M M DeAngelis; K A Ingalls; R W Nahf; L T Horton; M O Anderson; A J Collymore; W Ye; V Kouyoumjian; I S Zemsteva; J Tam; R Devine; D F Courtney; M T Renaud; H Nguyen; T J O'Connor; C Fizames; S Fauré; G Gyapay; C Dib; J Morissette; J B Orlin; B W Birren; N Goodman; J Weissenbach; T L Hawkins; S Foote; D C Page; E S Lander
Journal:  Science       Date:  1995-12-22       Impact factor: 47.728

9.  Complete genome sequence of the methanogenic archaeon, Methanococcus jannaschii.

Authors:  C J Bult; O White; G J Olsen; L Zhou; R D Fleischmann; G G Sutton; J A Blake; L M FitzGerald; R A Clayton; J D Gocayne; A R Kerlavage; B A Dougherty; J F Tomb; M D Adams; C I Reich; R Overbeek; E F Kirkness; K G Weinstock; J M Merrick; A Glodek; J L Scott; N S Geoghagen; J C Venter
Journal:  Science       Date:  1996-08-23       Impact factor: 47.728
  9 in total
  49 in total

1.  Automated diagnosis of data-model conflicts using metadata.

Authors:  R O Chen; R B Altman
Journal:  J Am Med Inform Assoc       Date:  1999 Sep-Oct       Impact factor: 4.497

2.  All in the family: structural and evolutionary relationships among three modular proteins with diverse functions and variable assembly.

Authors:  M Bergdoll; L D Eltis; A D Cameron; P Dumas; J T Bolin
Journal:  Protein Sci       Date:  1998-08       Impact factor: 6.725

3.  Hepatitis Bx antigen stimulates expression of a novel cellular gene, URG4, that promotes hepatocellular growth and survival.

Authors:  N Lale Satiroglu Tufan; Zhaorui Lian; Jie Liu; Jingbo Pan; Patrick Arbuthnot; Michael Kew; Marcy M Clayton; Minghua Zhu; Mark A Feitelson
Journal:  Neoplasia       Date:  2002 Jul-Aug       Impact factor: 5.715

4.  Microbial characterization during the early habitation of the International Space Station.

Authors:  V A Castro; A N Thrasher; M Healy; C M Ott; D L Pierson
Journal:  Microb Ecol       Date:  2004-02-02       Impact factor: 4.552

5.  DNannotator: Annotation software tool kit for regional genomic sequences.

Authors:  Chunyu Liu; Tom I Bonner; Tu Nguyen; Jennifer L Lyons; Susan L Christian; Elliot S Gershon
Journal:  Nucleic Acids Res       Date:  2003-07-01       Impact factor: 16.971

6.  Increased species diversity and extended habitat range of sulfur-oxidizing Thiomicrospira spp.

Authors:  T Brinkhoff; G Muyzer
Journal:  Appl Environ Microbiol       Date:  1997-10       Impact factor: 4.792

Review 7.  DNA microarrays--techniques and applications in microbial systems.

Authors:  T Majtán; G Bukovská; J Timko
Journal:  Folia Microbiol (Praha)       Date:  2004       Impact factor: 2.099

8.  Systematic sequence analysis and identification of tissue-specific or stress-responsive genes of NAC transcription factor family in rice.

Authors:  Yujie Fang; Jun You; Kabin Xie; Weibo Xie; Lizhong Xiong
Journal:  Mol Genet Genomics       Date:  2008-09-24       Impact factor: 3.291

9.  Ray Meta: scalable de novo metagenome assembly and profiling.

Authors:  Sébastien Boisvert; Frédéric Raymond; Elénie Godzaridis; François Laviolette; Jacques Corbeil
Journal:  Genome Biol       Date:  2012-12-22       Impact factor: 13.583

10.  Upregulated expression of a unique gene by hepatitis B x antigen promotes hepatocellular growth and tumorigenesis.

Authors:  Zhaorui Lian; Jie Liu; Li Li; Xianxing Li; N Lale Satiroglu Tufan; Marcy Clayton; Meng-Chao Wu; Hong-Yang Wang; Patrick Arbuthnot; Michael Kew; Mark A Feitelson
Journal:  Neoplasia       Date:  2003 May-Jun       Impact factor: 5.715
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