Literature DB >> 8533086

An STS-based map of the human genome.

T J Hudson1, L D Stein, S S Gerety, J Ma, A B Castle, J Silva, D K Slonim, R Baptista, L Kruglyak, S H Xu, X Hu, A M Colbert, C Rosenberg, M P Reeve-Daly, S Rozen, L Hui, X Wu, C Vestergaard, K M Wilson, J S Bae, S Maitra, S Ganiatsas, C A Evans, M M DeAngelis, K A Ingalls, R W Nahf, L T Horton, M O Anderson, A J Collymore, W Ye, V Kouyoumjian, I S Zemsteva, J Tam, R Devine, D F Courtney, M T Renaud, H Nguyen, T J O'Connor, C Fizames, S Fauré, G Gyapay, C Dib, J Morissette, J B Orlin, B W Birren, N Goodman, J Weissenbach, T L Hawkins, S Foote, D C Page, E S Lander.   

Abstract

A physical map has been constructed of the human genome containing 15,086 sequence-tagged sites (STSs), with an average spacing of 199 kilobases. The project involved assembly of a radiation hybrid map of the human genome containing 6193 loci and incorporated a genetic linkage map of the human genome containing 5264 loci. This information was combined with the results of STS-content screening of 10,850 loci against a yeast artificial chromosome library to produce an integrated map, anchored by the radiation hybrid and genetic maps. The map provides radiation hybrid coverage of 99 percent and physical coverage of 94 percent of the human genome. The map also represents an early step in an international project to generate a transcript map of the human genome, with more than 3235 expressed sequences localized. The STSs in the map provide a scaffold for initiating large-scale sequencing of the human genome.

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Year:  1995        PMID: 8533086     DOI: 10.1126/science.270.5244.1945

Source DB:  PubMed          Journal:  Science        ISSN: 0036-8075            Impact factor:   47.728


  147 in total

1.  High-resolution landmark framework for the sequence-ready mapping of Xq23-q26.1.

Authors:  H E Steingruber; A Dunham; A J Coffey; S M Clegg; G R Howell; G L Maslen; C E Scott; R Gwilliam; P J Hunt; E C Sotheran; E J Huckle; S E Hunt; P Dhami; C Soderlund; M A Leversha; D R Bentley; M T Ross
Journal:  Genome Res       Date:  1999-08       Impact factor: 9.043

2.  Radiation hybrid mapping of the zebrafish genome.

Authors:  N A Hukriede; L Joly; M Tsang; J Miles; P Tellis; J A Epstein; W B Barbazuk; F N Li; B Paw; J H Postlethwait; T J Hudson; L I Zon; J D McPherson; M Chevrette; I B Dawid; S L Johnson; M Ekker
Journal:  Proc Natl Acad Sci U S A       Date:  1999-08-17       Impact factor: 11.205

3.  A comprehensive view of human chromosome 1.

Authors:  P S White; E P Sulman; C J Porter; T C Matise
Journal:  Genome Res       Date:  1999-10       Impact factor: 9.043

4.  GenBank.

Authors:  D A Benson; I Karsch-Mizrachi; D J Lipman; J Ostell; B A Rapp; D L Wheeler
Journal:  Nucleic Acids Res       Date:  2000-01-01       Impact factor: 16.971

5.  RHdb: the radiation hybrid database.

Authors:  P Rodriguez-Tomé; P Lijnzaad
Journal:  Nucleic Acids Res       Date:  2000-01-01       Impact factor: 16.971

6.  RHdb: the Radiation Hybrid database.

Authors:  P Rodriguez-Tomé; P Lijnzaad
Journal:  Nucleic Acids Res       Date:  2001-01-01       Impact factor: 16.971

7.  A scan for linkage disequilibrium across the human genome.

Authors:  G A Huttley; M W Smith; M Carrington; S J O'Brien
Journal:  Genetics       Date:  1999-08       Impact factor: 4.562

8.  RHO--radiation hybrid ordering.

Authors:  A Ben-Dor; B Chor; D Pelleg
Journal:  Genome Res       Date:  2000-03       Impact factor: 9.043

9.  A fast and scalable radiation hybrid map construction and integration strategy.

Authors:  R Agarwala; D L Applegate; D Maglott; G D Schuler; A A Schäffer
Journal:  Genome Res       Date:  2000-03       Impact factor: 9.043

10.  Significant admixture linkage disequilibrium across 30 cM around the FY locus in African Americans.

Authors:  J A Lautenberger; J C Stephens; S J O'Brien; M W Smith
Journal:  Am J Hum Genet       Date:  2000-03       Impact factor: 11.025

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