Literature DB >> 8962130

A metric map of humans: 23,500 loci in 850 bands.

A Collins1, J Frezal, J Teague, N E Morton.   

Abstract

High-resolution maps integrated with the enhanced location data base software (LDB+) give improved estimates of genetic parameters and reveal characteristics of cytogenetic bands. Chiasma interference is intermediate between Kosambi and Carter-Falconer levels, as in Drosophila and the mouse. The autosomal genetic map is 2832 and 4348 centimorgans in males and females, respectively. Telomeric T-bands are strikingly associated with male recombination and gene density. Position and centromeric heterochromatin have large effects, but nontelomeric R-bands are not significantly different from G-bands. Several possible reasons are discussed. These regularities validate the maps, despite their high resolution and inevitable local errors. No other approach has been demonstrated to integrate such a large number of loci, which are increasing at about 45% per year. The maps and the data and software from which they are constructed are available through the Internet (http:@cedar.genetics.soton.ac.uk/public_html). Successive versions of this location data base may also be accessed on CD-ROM.

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Mesh:

Year:  1996        PMID: 8962130      PMCID: PMC26211          DOI: 10.1073/pnas.93.25.14771

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  23 in total

1.  The prior probability of autosomal linkage.

Authors:  R C Elston; K Lange
Journal:  Ann Hum Genet       Date:  1975-01       Impact factor: 1.670

2.  Algorithms for a location database.

Authors:  N E Morton; A Collins; S Lawrence; D C Shields
Journal:  Ann Hum Genet       Date:  1992-07       Impact factor: 1.670

3.  A second-generation linkage map of the human genome.

Authors:  J Weissenbach; G Gyapay; C Dib; A Vignal; J Morissette; P Millasseau; G Vaysseix; M Lathrop
Journal:  Nature       Date:  1992-10-29       Impact factor: 49.962

4.  Integration of gene maps: chromosome 1.

Authors:  A Collins; B J Keats; N Dracopoli; D C Shields; N E Morton
Journal:  Proc Natl Acad Sci U S A       Date:  1992-05-15       Impact factor: 11.205

5.  Error filtration, interference, and the human linkage map.

Authors:  D C Shields; A Collins; K H Buetow; N E Morton
Journal:  Proc Natl Acad Sci U S A       Date:  1991-08-01       Impact factor: 11.205

6.  Parameters of the human genome.

Authors:  N E Morton
Journal:  Proc Natl Acad Sci U S A       Date:  1991-09-01       Impact factor: 11.205

7.  Centre d'etude du polymorphisme humain (CEPH): collaborative genetic mapping of the human genome.

Authors:  J Dausset; H Cann; D Cohen; M Lathrop; J M Lalouel; R White
Journal:  Genomics       Date:  1990-03       Impact factor: 5.736

8.  A mapping function for man.

Authors:  D C Rao; N E Morton; J Lindsten; M Hultén; S Yee
Journal:  Hum Hered       Date:  1977       Impact factor: 0.444

9.  Guidelines for human linkage maps. An International System for Human Linkage Maps (ISLM, 1990).

Authors:  B J Keats; S L Sherman; N E Morton; E B Robson; K H Buetow; P E Cartwright; A Chakravarti; U Francke; P P Green; J Ott
Journal:  Ann Hum Genet       Date:  1991-01       Impact factor: 1.670

10.  Digitized and differentially shaded human chromosome ideograms for genomic applications.

Authors:  U Francke
Journal:  Cytogenet Cell Genet       Date:  1994
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  69 in total

1.  Identification of the gene-richest bands in human prometaphase chromosomes.

Authors:  S Saccone; C Federico; I Solovei; M F Croquette; G Della Valle; G Bernardi
Journal:  Chromosome Res       Date:  1999       Impact factor: 5.239

2.  Long homozygous chromosomal segments in reference families from the centre d'Etude du polymorphisme humain.

Authors:  K W Broman; J L Weber
Journal:  Am J Hum Genet       Date:  1999-12       Impact factor: 11.025

3.  Shwachman-Diamond syndrome with exocrine pancreatic dysfunction and bone marrow failure maps to the centromeric region of chromosome 7.

Authors:  S Goobie; M Popovic; J Morrison; L Ellis; H Ginzberg; G R Boocock; N Ehtesham; C Bétard; C G Brewer; N M Roslin; T J Hudson; K Morgan; T M Fujiwara; P R Durie; J M Rommens
Journal:  Am J Hum Genet       Date:  2001-03-15       Impact factor: 11.025

4.  Age and sex based genetic locus heterogeneity in type 1 diabetes.

Authors:  A D Paterson; A Petronis
Journal:  J Med Genet       Date:  2000-03       Impact factor: 6.318

5.  A locus for primary ciliary dyskinesia maps to chromosome 19q.

Authors:  M Meeks; A Walne; S Spiden; H Simpson; H Mussaffi-Georgy; H D Hamam; E L Fehaid; M Cheehab; M Al-Dabbagh; S Polak-Charcon; H Blau; A O'Rawe; H M Mitchison; R M Gardiner; E Chung
Journal:  J Med Genet       Date:  2000-04       Impact factor: 6.318

6.  Bayesian fine-scale mapping of disease loci, by hidden Markov models.

Authors:  A P Morris; J C Whittaker; D J Balding
Journal:  Am J Hum Genet       Date:  2000-06-01       Impact factor: 11.025

7.  Characterization of human crossover interference.

Authors:  K W Broman; J L Weber
Journal:  Am J Hum Genet       Date:  2000-05-08       Impact factor: 11.025

8.  Genetic epidemiology of single-nucleotide polymorphisms.

Authors:  A Collins; C Lonjou; N E Morton
Journal:  Proc Natl Acad Sci U S A       Date:  1999-12-21       Impact factor: 11.205

9.  A sequence-based integrated map of chromosome 22.

Authors:  W J Tapper; N E Morton; I Dunham; X Ke; A Collins
Journal:  Genome Res       Date:  2001-07       Impact factor: 9.043

10.  Localization of a susceptibility gene for familial nonmedullary thyroid carcinoma to chromosome 2q21.

Authors:  J D McKay; F Lesueur; L Jonard; A Pastore; J Williamson; L Hoffman; J Burgess; A Duffield; M Papotti; M Stark; H Sobol; B Maes; A Murat; H Kääriäinen; M Bertholon-Grégoire; M Zini; M A Rossing; M E Toubert; F Bonichon; M Cavarec; A M Bernard; A Boneu; F Leprat; O Haas; C Lasset; M Schlumberger; F Canzian; D E Goldgar; G Romeo
Journal:  Am J Hum Genet       Date:  2001-07-02       Impact factor: 11.025

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