Literature DB >> 8222762

Digitized and differentially shaded human chromosome ideograms for genomic applications.

U Francke1.   

Abstract

Human chromosome ideograms that depict 850 bands, numbered in agreement with ISCN (1981) nomenclature but based on actual measurements of band sizes and differentiated by five shades of staining intensity, have been digitized using commercially available graphics software. They provide for more accurate estimates of distances within chromosome arms, DNA content of chromosome bands and correlation between cytogenetic, molecular and genetic linkage maps than the standard ISCN ideograms.

Entities:  

Mesh：

Year:  1994        PMID： 8222762     DOI： 10.1159/000133633

Source DB:  PubMed          Journal:  Cytogenet Cell Genet        ISSN： 0301-0171


  40 in total

1.  Identification of the gene-richest bands in human prometaphase chromosomes.

Authors:  S Saccone; C Federico; I Solovei; M F Croquette; G Della Valle; G Bernardi
Journal:  Chromosome Res       Date:  1999       Impact factor: 5.239

2.  Gene density in the Giemsa bands of human chromosomes.

Authors:  C Federico; L Andreozzi; S Saccone; G Bernardi
Journal:  Chromosome Res       Date:  2000       Impact factor: 5.239

3.  Genes, isochores and bands in human chromosomes 21 and 22.

Authors:  S Saccone; A Pavlicek; C Federico; J Paces; G Bernard
Journal:  Chromosome Res       Date:  2001       Impact factor: 5.239

4.  In silico chromosome staining: reconstruction of Giemsa bands from the whole human genome sequence.

Authors:  Yoshihito Niimura; Takashi Gojobori
Journal:  Proc Natl Acad Sci U S A       Date:  2002-01-15       Impact factor: 11.205

5.  A sequence-based integrated map of chromosome 22.

Authors:  W J Tapper; N E Morton; I Dunham; X Ke; A Collins
Journal:  Genome Res       Date:  2001-07       Impact factor: 9.043

6.  Chromosomal G-dark bands determine the spatial organization of centromeric heterochromatin in the nucleus.

Authors:  C Carvalho; H M Pereira; J Ferreira; C Pina; D Mendonça; A C Rosa; M Carmo-Fonseca
Journal:  Mol Biol Cell       Date:  2001-11       Impact factor: 4.138

7.  A new platform linking chromosomal and sequence information.

Authors:  Agata Kowalska; Eva Bozsaky; Thomas Ramsauer; Dietmar Rieder; Gabriela Bindea; Thomas Lörch; Zlatko Trajanoski; Peter F Ambros
Journal:  Chromosome Res       Date:  2007-05-10       Impact factor: 5.239

8.  Replication timing, chromosomal bands, and isochores.

Authors:  Maria Costantini; Giorgio Bernardi
Journal:  Proc Natl Acad Sci U S A       Date:  2008-02-27       Impact factor: 11.205

9.  The radial arrangement of the human chromosome 7 in the lymphocyte cell nucleus is associated with chromosomal band gene density.

Authors:  Concetta Federico; Catia Daniela Cantarella; Patrizia Di Mare; Sabrina Tosi; Salvatore Saccone
Journal:  Chromosoma       Date:  2008-04-17       Impact factor: 4.316

10.  Human chromosomal bands: nested structure, high-definition map and molecular basis.

Authors:  Maria Costantini; Oliver Clay; Concetta Federico; Salvatore Saccone; Fabio Auletta; Giorgio Bernardi
Journal:  Chromosoma       Date:  2006-10-28       Impact factor: 4.316
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