Literature DB >> 8878698

Estimation of deleterious-mutation parameters in natural populations.

H W Deng1, M Lynch.   

Abstract

The rate and average effects of spontaneous deleterious mutations are important determinants of the evolution of breeding systems and of the vulnerability of small populations to extinction. Nevertheless, few attempts have been made to estimate the properties of such mutations, and those studies that have been performed have been extremely labor intensive, relying on long-term, laboratory mutation-accumulation experiments. We present an alternative to the latter approach. For populations in which the genetic variance for fitness is a consequence of selection-mutation balance, the mean fitness and genetic variance of fitness in outbred generations can be expressed as simple functions of the genomic mutation rate, average homozygous effect and average dominance coefficient of new mutations. Using empirical estimates for the mean and genetic variance of fitness, these expressions can then be solved to obtain joint estimates of the deleterious-mutation parameters. We employ computer simulations to evaluate the degree of bias of the estimators and present some general recommendations on the application of the technique. Our procedures provide some hope for obtaining estimates of the properties of deleterious mutations from a wide phylogenetic range of species as well as a mechanism for testing the validity of alternative models for the maintenance of genetic variance for fitness.

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Year:  1996        PMID: 8878698      PMCID: PMC1207507     

Source DB:  PubMed          Journal:  Genetics        ISSN: 0016-6731            Impact factor:   4.562


  18 in total

1.  THE MUTATION LOAD IN SMALL POPULATIONS.

Authors:  M KIMURA; T MARUYAMA; J F CROW
Journal:  Genetics       Date:  1963-10       Impact factor: 4.562

2.  Effects of P element insertions on quantitative traits in Drosophila melanogaster.

Authors:  T F Mackay; R F Lyman; M S Jackson
Journal:  Genetics       Date:  1992-02       Impact factor: 4.562

3.  AN ESTIMATE OF THE MUTATIONAL DAMAGE IN MAN FROM DATA ON CONSANGUINEOUS MARRIAGES.

Authors:  N E Morton; J F Crow; H J Muller
Journal:  Proc Natl Acad Sci U S A       Date:  1956-11       Impact factor: 11.205

Review 4.  Comparing mutational variabilities.

Authors:  D Houle; B Morikawa; M Lynch
Journal:  Genetics       Date:  1996-07       Impact factor: 4.562

5.  Mutation load and mutation-selection-balance in quantitative genetic traits.

Authors:  R Bürger; J Hofbauer
Journal:  J Math Biol       Date:  1994       Impact factor: 2.259

6.  A pleiotropic nonadditive model of variation in quantitative traits.

Authors:  A Caballero; P D Keightley
Journal:  Genetics       Date:  1994-11       Impact factor: 4.562

7.  The molecular basis of dominance.

Authors:  H Kacser; J A Burns
Journal:  Genetics       Date:  1981 Mar-Apr       Impact factor: 4.562

8.  The mutational meltdown in asexual populations.

Authors:  M Lynch; R Bürger; D Butcher; W Gabriel
Journal:  J Hered       Date:  1993 Sep-Oct       Impact factor: 2.645

9.  The distribution of mutation effects on viability in Drosophila melanogaster.

Authors:  P D Keightley
Journal:  Genetics       Date:  1994-12       Impact factor: 4.562

10.  Allozyme-associated heterosis in Drosophila melanogaster.

Authors:  D Houle
Journal:  Genetics       Date:  1989-12       Impact factor: 4.562

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  27 in total

1.  Estimation of parameters of deleterious mutations in partial selfing or partial outcrossing populations and in nonequilibrium populations.

Authors:  J Li; H W Deng
Journal:  Genetics       Date:  2000-04       Impact factor: 4.562

2.  Patterns of inbreeding depression and architecture of the load in subdivided populations.

Authors:  Sylvain Glémin; Joëlle Ronfort; Thomas Bataillon
Journal:  Genetics       Date:  2003-12       Impact factor: 4.562

3.  Deleterious mutations and the genetic variance of male fitness components in Mimulus guttatus.

Authors:  John K Kelly
Journal:  Genetics       Date:  2003-07       Impact factor: 4.562

Review 4.  Measurements of spontaneous rates of mutations in the recent past and the near future.

Authors:  Fyodor A Kondrashov; Alexey S Kondrashov
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2010-04-27       Impact factor: 6.237

5.  Analysis of the estimators of the average coefficient of dominance of deleterious mutations.

Authors:  B Fernández; A García-Dorado; A Caballero
Journal:  Genetics       Date:  2004-10       Impact factor: 4.562

6.  The effect of antagonistic pleiotropy on the estimation of the average coefficient of dominance of deleterious mutations.

Authors:  B Fernández; A García-Dorado; A Caballero
Journal:  Genetics       Date:  2005-08-22       Impact factor: 4.562

7.  Inferences about the distribution of dominance drawn from yeast gene knockout data.

Authors:  Aneil F Agrawal; Michael C Whitlock
Journal:  Genetics       Date:  2010-11-23       Impact factor: 4.562

8.  Inference of genome-wide mutation rates and distributions of mutation effects for fitness traits: a simulation study.

Authors:  P D Keightley
Journal:  Genetics       Date:  1998-11       Impact factor: 4.562

9.  Direct estimate of the mutation rate and the distribution of fitness effects in the yeast Saccharomyces cerevisiae.

Authors:  D M Wloch; K Szafraniec; R H Borts; R Korona
Journal:  Genetics       Date:  2001-10       Impact factor: 4.562

10.  Inferring Deleterious-Mutation Parameters in Natural Daphnia Populations.

Authors:  Hong-Wen Deng
Journal:  Biol Proced Online       Date:  1998-05-14       Impact factor: 3.244

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