Literature DB >> 8785302

Dielectric constant and ionic strength effects on DNA precipitation.

S Flock1, R Labarbe, C Houssier.   

Abstract

We have investigated the effect of different zwitterionic compounds on DNA precipitation induced by spermine4+. Glycine, beta-alanine, 4-aminobutyric acid, and 6-aminocaproic acid have shown an increasing capacity to attenuate DNA precipitation. This protection effect has been correlated with the dielectric constant increase of their corresponding solutions. Calculations based on these experimental data and counter-ion condensation theory have confirmed the importance of this parameter for DNA-ion interactions and precipitation mechanisms. We have also observed a resolubilization of DNA in the presence of 6-aminocaproic acid at high spermine4+ concentration and in the presence of glycine at high spermidine3+ concentration. This could be explained by an increase of screening effect with polyamine concentration.

Entities:  

Mesh:

Substances:

Year:  1996        PMID: 8785302      PMCID: PMC1225072          DOI: 10.1016/S0006-3495(96)79705-9

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  41 in total

1.  Relative binding affinities of monovalent cations for double-stranded DNA.

Authors:  M L Bleam; C F Anderson; M T Record
Journal:  Proc Natl Acad Sci U S A       Date:  1980-06       Impact factor: 11.205

2.  Condensation and precipitation of chromatin by multivalent cations.

Authors:  E Fredericq; R Hacha; P Colson; C Houssier
Journal:  J Biomol Struct Dyn       Date:  1991-02

3.  Monomolecular condensation of lambda-DNA induced by cobalt hexamine.

Authors:  J Widom; R L Baldwin
Journal:  Biopolymers       Date:  1983-06       Impact factor: 2.505

4.  Interaction of chromatin with NaCl and MgCl2. Solubility and binding studies, transition to and characterization of the higher-order structure.

Authors:  J Ausio; N Borochov; D Seger; H Eisenberg
Journal:  J Mol Biol       Date:  1984-08-15       Impact factor: 5.469

5.  Cation-induced toroidal condensation of DNA studies with Co3+(NH3)6.

Authors:  J Widom; R L Baldwin
Journal:  J Mol Biol       Date:  1980-12-25       Impact factor: 5.469

6.  Nuclear magnetic resonance studies of polyamine binding to a defined DNA sequence.

Authors:  D E Wemmer; K S Srivenugopal; B R Reid; D R Morris
Journal:  J Mol Biol       Date:  1985-09-20       Impact factor: 5.469

7.  Osmotic effectors and DNA structure: effect of glycine on precipitation of DNA by multivalent cations.

Authors:  S Flock; R Labarbe; C Houssier
Journal:  J Biomol Struct Dyn       Date:  1995-08

8.  Comparative study of the condensation of chicken erythrocyte and calf thymus chromatins by di- and multivalent cations.

Authors:  R Marquet; P Colson; A M Matton; C Houssier; M Thiry; G Goessens
Journal:  J Biomol Struct Dyn       Date:  1988-02

9.  Salt-dependent co-operative interaction of histone H1 with linear DNA.

Authors:  D J Clark; J O Thomas
Journal:  J Mol Biol       Date:  1986-02-20       Impact factor: 5.469

10.  Condensation of DNA by multivalent cations: considerations on mechanism.

Authors:  V A Bloomfield
Journal:  Biopolymers       Date:  1991-11       Impact factor: 2.505

View more
  7 in total

1.  Dielectric control of counterion-induced single-chain folding transition of DNA.

Authors:  Damien Baigl; Kenichi Yoshikawa
Journal:  Biophys J       Date:  2005-03-04       Impact factor: 4.033

2.  Electrostatic exclusion of neutral solutes from condensed DNA and other charged phases.

Authors:  Brian A Todd
Journal:  Biophys J       Date:  2009-07-22       Impact factor: 4.033

3.  23Na NMR study of the effect of organic osmolytes on DNA counterion atmosphere.

Authors:  S Flock; R Labarbe; C Houssier
Journal:  Biophys J       Date:  1996-09       Impact factor: 4.033

4.  Ion-mediated nucleic acid helix-helix interactions.

Authors:  Zhi-Jie Tan; Shi-Jie Chen
Journal:  Biophys J       Date:  2006-04-28       Impact factor: 4.033

5.  Effect of DNA Aptamer Concentration on the Conductivity of a Water-Gated Al:ZnO Thin-Film Transistor-Based Biosensor.

Authors:  Andrejs Ogurcovs; Kevon Kadiwala; Eriks Sledevskis; Marina Krasovska; Ilona Plaksenkova; Edgars Butanovs
Journal:  Sensors (Basel)       Date:  2022-04-29       Impact factor: 3.847

6.  Electrochemical Studies of Cation Condensation-Induced Collapse of Surface-Bound DNA.

Authors:  Kiana S Sykes; Luiz F L Oliveira; George Stan; Ryan J White
Journal:  Langmuir       Date:  2019-09-25       Impact factor: 3.882

7.  Systematic re-evaluation of the long-used standard protocol of urease-dependent metabolome sample preparation.

Authors:  Jungyeon Kim; Joong Kyong Ahn; Yu Eun Cheong; Sung-Joon Lee; Hoon-Suk Cha; Kyoung Heon Kim
Journal:  PLoS One       Date:  2020-03-17       Impact factor: 3.240

  7 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.