Literature DB >> 8874025

23Na NMR study of the effect of organic osmolytes on DNA counterion atmosphere.

S Flock1, R Labarbe, C Houssier.   

Abstract

The effect of different organic osmolytes on the DNA counterion condensation layer has been investigated by 23Na NMR relaxation measurements. The zwitterionic compounds glycine, beta-alanine, 4-aminobutyric acid, and 6-aminocaproic acid have shown an increasing capacity to decrease the amount of sodium ions in the vicinity of the macromolecule. The experimental data have been correlated with the dielectric constant increase in their corresponding solutions and have been compared with the prediction of counterion condensation theory. Polyols (sorbitol and mannitol) did not display the same effect. These compounds largely increase the relaxation rate of sodium ions in the proximity of DNA, unlike the zwitterionic compounds. This probably results from a perturbation of the water dynamic around the macromolecule, of the primary or secondary hydration shell of the sodium nuclei involved, or both.

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Year:  1996        PMID: 8874025      PMCID: PMC1233618          DOI: 10.1016/S0006-3495(96)79354-2

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  27 in total

1.  Monte-Carlo-self consistent field method in the polyelectrolyte theory.

Authors:  P N Vorontsov-Velyaminov; A P Lyubartsev
Journal:  J Biomol Struct Dyn       Date:  1989-12

2.  Relative binding affinities of monovalent cations for double-stranded DNA.

Authors:  M L Bleam; C F Anderson; M T Record
Journal:  Proc Natl Acad Sci U S A       Date:  1980-06       Impact factor: 11.205

3.  Organic osmotic effectors and chromatin structure.

Authors:  A Buche; P Colson; C Houssier
Journal:  J Biomol Struct Dyn       Date:  1990-12

4.  Interaction of an N-methylated polyamine analogue, hexamethonium(2+), with NaDNA: quantitative 14N and 23Na NMR relaxation rate studies of the cation-exchange process.

Authors:  S Padmanabhan; B Richey; C F Anderson; M T Record
Journal:  Biochemistry       Date:  1988-06-14       Impact factor: 3.162

5.  Counterion-induced condesation of deoxyribonucleic acid. a light-scattering study.

Authors:  R W Wilson; V A Bloomfield
Journal:  Biochemistry       Date:  1979-05-29       Impact factor: 3.162

6.  Sodium ion and solvent nuclear relaxation results in aqueous solutions of DNA.

Authors:  L van Dijk; M L Gruwel; W Jesse; J de Bleijser; J C Leyte
Journal:  Biopolymers       Date:  1987-02       Impact factor: 2.505

7.  Effect of organic effectors on chromatin solubility, DNA-histone H1 interactions, DNA and histone H1 structures.

Authors:  A Buche; P Colson; C Houssier
Journal:  J Biomol Struct Dyn       Date:  1993-08

8.  Osmotic effectors and DNA structure: effect of glycine on precipitation of DNA by multivalent cations.

Authors:  S Flock; R Labarbe; C Houssier
Journal:  J Biomol Struct Dyn       Date:  1995-08

9.  Magnesium-DNA interactions from interpretation of 25Mg-nmr relaxation rates: field and coion dependence.

Authors:  L A Wright; L E Lerner
Journal:  Biopolymers       Date:  1994-06       Impact factor: 2.505

10.  Condensation of DNA by multivalent cations: considerations on mechanism.

Authors:  V A Bloomfield
Journal:  Biopolymers       Date:  1991-11       Impact factor: 2.505

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  2 in total

1.  Electrostatic exclusion of neutral solutes from condensed DNA and other charged phases.

Authors:  Brian A Todd
Journal:  Biophys J       Date:  2009-07-22       Impact factor: 4.033

2.  Compatible solute influence on nucleic acids: many questions but few answers.

Authors:  Matthias Kurz
Journal:  Saline Syst       Date:  2008-06-03
  2 in total

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