Literature DB >> 6471101

Interaction of chromatin with NaCl and MgCl2. Solubility and binding studies, transition to and characterization of the higher-order structure.

J Ausio, N Borochov, D Seger, H Eisenberg.   

Abstract

Chicken erythrocyte chromatin containing histones H1 and H5 was carefully separated into a number of well-characterized fractions. A distinction could be made between chromatin insoluble in NaCl above about 80 mM, and chromatin soluble at all NaCl concentrations. Both chromatin forms were indistinguishable electrophoretically and both underwent the transition from the low salt "10 nm" coil to the "30 nm" higher-order structure solenoid by either raising the MgCl2 concentration to about 0.3 mM or the NaCl concentration to about 75 mM. The transitions were examined in detail by elastic light-scattering procedures. It could be shown that the 10 nm form is a flexible coil. For the 30 nm solenoid, the assumption of a rigid cylindrical structure was in good agreement with 5.7 nucleosomes per helical turn. However, disagreement of calculated frictional parameters with values derived from quasielastic light-scattering and sedimentation introduced the possibility that the higher-order structure, under these conditions, is more extended, flexible, or perhaps a mixture of structures. Values for density and refractive index increments of chromatin are also given. To understand the interaction of chromatin with NaCl and with MgCl2, a number of experiments were undertaken to study solubility, precipitation, conformational transitions and binding of ions over a wide range of experimental conditions, including chromatin concentration.

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Year:  1984        PMID: 6471101     DOI: 10.1016/0022-2836(84)90291-2

Source DB:  PubMed          Journal:  J Mol Biol        ISSN: 0022-2836            Impact factor:   5.469


  27 in total

1.  The superstructure of chromatin and its condensation mechanism. VI. Electric dichroism and model calculations.

Authors:  M H Koch; Z Sayers; A M Michon; P Sicre; R Marquet; C Houssier
Journal:  Eur Biophys J       Date:  1989       Impact factor: 1.733

2.  Pulling the chromatin.

Authors:  C Claudet; J Bednar
Journal:  Eur Phys J E Soft Matter       Date:  2006-03-14       Impact factor: 1.890

3.  Nucleosome geometry and internucleosomal interactions control the chromatin fiber conformation.

Authors:  Nick Kepper; Dietrich Foethke; Rene Stehr; Gero Wedemann; Karsten Rippe
Journal:  Biophys J       Date:  2008-01-22       Impact factor: 4.033

4.  Hydrodynamic studies on defined heterochromatin fragments support a 30-nm fiber having six nucleosomes per turn.

Authors:  Rodolfo Ghirlando; Gary Felsenfeld
Journal:  J Mol Biol       Date:  2008-01-03       Impact factor: 5.469

5.  Chromatin folding into higher order structure.

Authors:  K O Greulich; J Ausio; D Seger; E Wachtel; H Eisenberg
Journal:  Biophys J       Date:  1986-01       Impact factor: 4.033

6.  Revisit of Reconstituted 30-nm Nucleosome Arrays Reveals an Ensemble of Dynamic Structures.

Authors:  Bing-Rui Zhou; Jiansheng Jiang; Rodolfo Ghirlando; Davood Norouzi; K N Sathish Yadav; Hanqiao Feng; Rui Wang; Ping Zhang; Victor Zhurkin; Yawen Bai
Journal:  J Mol Biol       Date:  2018-06-27       Impact factor: 5.469

7.  sNASP, a histone H1-specific eukaryotic chaperone dimer that facilitates chromatin assembly.

Authors:  Ron M Finn; Kristen Browne; Kim C Hodgson; Juan Ausió
Journal:  Biophys J       Date:  2008-05-02       Impact factor: 4.033

8.  Driving proteins off DNA using applied tension.

Authors:  J F Marko; E D Siggia
Journal:  Biophys J       Date:  1997-10       Impact factor: 4.033

9.  ATP as an alternative inhibitor of bacterial and endogenous nucleases and its effect on native chromatin compaction.

Authors:  N L Rosenberg
Journal:  Mol Cell Biochem       Date:  1987-08       Impact factor: 3.396

10.  Loosening of the phage structure in a low ionic strength environment.

Authors:  G Rontó; K Tóth; G Csik; L A Feigin; D T Svergun; A T Dembo; E V Shtikova
Journal:  Eur Biophys J       Date:  1988       Impact factor: 1.733

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