Literature DB >> 8687379

Modulation of the higher-order folding of chromatin by deletion of histone H3 and H4 terminal domains.

W A Krajewski1, J Ausió.   

Abstract

The 'tails' of histones H3 and H4 were removed by light in situ trypsin digestion of the nuclei. The alterations in the higher-order folding of chromatin resulting from this treatment were monitored by ethidium bromide titration. We found that DNA-intercalation of ethidium bromide under these conditions exhibited a complex concentration effect that was dependent on the extent of chromatin folding. This most likely reflects the structural transitions of chromatin during its folding as a result of the changes in the nucleosome linker twist [Woodcock, Grigoryev, Horowitz and Whitaker (1993) Proc. Natl. Acad. Sci. U.S.A. 90, 9021-9025]. These results strongly suggest that the H3 and H4 terminal domains play a very important role in chromatin folding. We discuss the molecular basis of this phenomenon and propose a novel generalized model for the higher-order folding of chromatin.

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Year:  1996        PMID: 8687379      PMCID: PMC1217363          DOI: 10.1042/bj3160395

Source DB:  PubMed          Journal:  Biochem J        ISSN: 0264-6021            Impact factor:   3.857


  41 in total

1.  Direct mechanical measurements of the elasticity of single DNA molecules by using magnetic beads.

Authors:  S B Smith; L Finzi; C Bustamante
Journal:  Science       Date:  1992-11-13       Impact factor: 47.728

2.  Accessibility and structural role of histone domains in chromatin. biophysical and immunochemical studies of progressive digestion with immobilized proteases.

Authors:  M F Hacques; S Muller; G De Murcia; M H Van Regenmortel; C Marion
Journal:  J Biomol Struct Dyn       Date:  1990-12

Review 3.  Toward a unified model of chromatin folding.

Authors:  J Widom
Journal:  Annu Rev Biophys Biophys Chem       Date:  1989

4.  Use of selectively trypsinized nucleosome core particles to analyze the role of the histone "tails" in the stabilization of the nucleosome.

Authors:  J Ausio; F Dong; K E van Holde
Journal:  J Mol Biol       Date:  1989-04-05       Impact factor: 5.469

5.  Cleavage of structural proteins during the assembly of the head of bacteriophage T4.

Authors:  U K Laemmli
Journal:  Nature       Date:  1970-08-15       Impact factor: 49.962

6.  A chromatin folding model that incorporates linker variability generates fibers resembling the native structures.

Authors:  C L Woodcock; S A Grigoryev; R A Horowitz; N Whitaker
Journal:  Proc Natl Acad Sci U S A       Date:  1993-10-01       Impact factor: 11.205

7.  A simple and reproducible method for analysis of chromatin condensation.

Authors:  W A Krajewski; V M Panin; S V Razin
Journal:  Biochem Biophys Res Commun       Date:  1993-05-28       Impact factor: 3.575

8.  UV-induced structural changes in chromatin.

Authors:  H Lang; C Zimmer
Journal:  Biomed Biochim Acta       Date:  1985

9.  Binding of ethidium to the nucleosome core particle. 2. Internal and external binding modes.

Authors:  C T McMurray; E W Small; K E van Holde
Journal:  Biochemistry       Date:  1991-06-11       Impact factor: 3.162

10.  Footprinting of linker histones H5 and H1 on the nucleosome.

Authors:  D Z Staynov; C Crane-Robinson
Journal:  EMBO J       Date:  1988-12-01       Impact factor: 11.598

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  14 in total

Review 1.  Modifications of the histone N-terminal domains. Evidence for an "epigenetic code"?

Authors:  A Imhof; P B Becker
Journal:  Mol Biotechnol       Date:  2001-01       Impact factor: 2.695

2.  Computer simulation of the 30-nanometer chromatin fiber.

Authors:  Gero Wedemann; Jörg Langowski
Journal:  Biophys J       Date:  2002-06       Impact factor: 4.033

3.  H3 and H4 histone tails play a central role in the interactions of recombinant NCPs.

Authors:  Aurélie Bertin; Madalena Renouard; Jan Skov Pedersen; Françoise Livolant; Dominique Durand
Journal:  Biophys J       Date:  2007-01-19       Impact factor: 4.033

4.  Role of histone tails in chromatin folding revealed by a mesoscopic oligonucleosome model.

Authors:  Gaurav Arya; Tamar Schlick
Journal:  Proc Natl Acad Sci U S A       Date:  2006-10-23       Impact factor: 11.205

5.  H2A and H2B tails are essential to properly reconstitute nucleosome core particles.

Authors:  Aurélie Bertin; Dominique Durand; Madalena Renouard; Françoise Livolant; Stéphanie Mangenot
Journal:  Eur Biophys J       Date:  2007-09-19       Impact factor: 1.733

6.  30 nm chromatin fibre decompaction requires both H4-K16 acetylation and linker histone eviction.

Authors:  Philip J J Robinson; Woojin An; Andrew Routh; Fabrizio Martino; Lynda Chapman; Robert G Roeder; Daniela Rhodes
Journal:  J Mol Biol       Date:  2008-04-29       Impact factor: 5.469

7.  Dynamics of chromatin decondensation reveals the structural integrity of a mechanically prestressed nucleus.

Authors:  Aprotim Mazumder; T Roopa; Aakash Basu; L Mahadevan; G V Shivashankar
Journal:  Biophys J       Date:  2008-06-13       Impact factor: 4.033

8.  The silent information regulator 3 protein, SIR3p, binds to chromatin fibers and assembles a hypercondensed chromatin architecture in the presence of salt.

Authors:  Steven J McBryant; Christine Krause; Christopher L Woodcock; Jeffrey C Hansen
Journal:  Mol Cell Biol       Date:  2008-03-24       Impact factor: 4.272

Review 9.  Nuclear matrix, dynamic histone acetylation and transcriptionally active chromatin.

Authors:  J R Davie
Journal:  Mol Biol Rep       Date:  1997-08       Impact factor: 2.316

10.  Tax recruitment of CBP/p300, via the KIX domain, reveals a potent requirement for acetyltransferase activity that is chromatin dependent and histone tail independent.

Authors:  Sara A Georges; Holli A Giebler; Philip A Cole; Karolin Luger; Paul J Laybourn; Jennifer K Nyborg
Journal:  Mol Cell Biol       Date:  2003-05       Impact factor: 4.272

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