Literature DB >> 8556432

Principles and methods for the analysis and purification of synthetic deoxyribonucleotides by high-performance liquid chromatography.

W J Warren1, G Vella.   

Abstract

The need for high-purity oligodeoxyribonucleotides for various applications has resulted in the development of novel synthesis, purification, and analytical techniques. A diversity of methods, including polyacrylamide slab gel electrophoresis, capillary gel electrophoresis, as well as high-performance liquid chromatography (HPLC), have been successfully used to aid in the characterization and isolation of these synthetic compounds. The information contained in this review article primarily details both the theoretical and practical aspects related to the use of HPLC for the analysis and purification of synthetic DNA. In addition, a variety of postsynthesis sample preparation protocols, commonly employed prior to and after HPLC, are described.

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Year:  1995        PMID: 8556432     DOI: 10.1007/bf02921611

Source DB:  PubMed          Journal:  Mol Biotechnol        ISSN: 1073-6085            Impact factor:   2.695


  16 in total

1.  Regulation of gene expression with double-stranded phosphorothioate oligonucleotides.

Authors:  A Bielinska; R A Shivdasani; L Q Zhang; G J Nabel
Journal:  Science       Date:  1990-11-16       Impact factor: 47.728

2.  Capillary gel affinity electrophoresis of DNA fragments.

Authors:  A Guttman; N Cooke
Journal:  Anal Chem       Date:  1991-09-15       Impact factor: 6.986

3.  Rapid analysis and quantitation of PCR products by high-performance liquid chromatography.

Authors:  W Warren; T Wheat; P Knudsen
Journal:  Biotechniques       Date:  1991-08       Impact factor: 1.993

4.  High-performance liquid chromatographic analysis of oligodeoxyribonucleotide base composition.

Authors:  J S Eadie; L J McBride; J W Efcavitch; L B Hoff; R Cathcart
Journal:  Anal Biochem       Date:  1987-09       Impact factor: 3.365

5.  Separation of oligonucleotides by high-performance ion-exchange chromatography on a non-porous ion exchanger.

Authors:  Y Kato; T Kitamura; A Mitsui; Y Yamasaki; T Hashimoto; T Murotsu; S Fukushige; K Matsubara
Journal:  J Chromatogr       Date:  1988-08-05

6.  Purification of small oligonucleotides by polyacrylamide gel electrophoresis and transfer to diethylaminoethyl paper.

Authors:  A V Vorndam; J Kerschner
Journal:  Anal Biochem       Date:  1986-02-01       Impact factor: 3.365

7.  HPLC analysis of synthetic oligonucleotides using spectral contrast techniques.

Authors:  W J Warren; W A Stanick; M V Gorenstein; P M Young
Journal:  Biotechniques       Date:  1995-02       Impact factor: 1.993

8.  Ion-exchange high-performance liquid chromatography analysis of oligodeoxyribonucleotide phosphorothioates.

Authors:  V Metelev; S Agrawal
Journal:  Anal Biochem       Date:  1992-02-01       Impact factor: 3.365

9.  On-line recognition and quantitation of coeluting hypoxanthine and guanine in reversed-phase high-performance liquid chromatography of placental tissue extracts: photodiode-array detection and spectral analysis of coeluting peaks.

Authors:  I Szabo; M H Maguire
Journal:  Anal Biochem       Date:  1993-12       Impact factor: 3.365

10.  DNA sequencing with chain-terminating inhibitors.

Authors:  F Sanger; S Nicklen; A R Coulson
Journal:  Proc Natl Acad Sci U S A       Date:  1977-12       Impact factor: 11.205

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  3 in total

1.  Temperature-dependent FRET spectroscopy for the high-throughput analysis of self-assembled DNA nanostructures in real time.

Authors:  Barbara Saccà; Rebecca Meyer; Christof M Niemeyer
Journal:  Nat Protoc       Date:  2009       Impact factor: 13.491

2.  RecJ 5' Exonuclease Digestion of Oligonucleotide Failure Strands: A "Green" Method of Trityl-On Purification.

Authors:  Michael Jensen; Ronald Davis
Journal:  Biochemistry       Date:  2017-05-01       Impact factor: 3.162

3.  A Platform for Discovery and Quantification of Modified Ribonucleosides in RNA: Application to Stress-Induced Reprogramming of tRNA Modifications.

Authors:  Weiling Maggie Cai; Yok Hian Chionh; Fabian Hia; Chen Gu; Stefanie Kellner; Megan E McBee; Chee Sheng Ng; Yan Ling Joy Pang; Erin G Prestwich; Kok Seong Lim; I Ramesh Babu; Thomas J Begley; Peter C Dedon
Journal:  Methods Enzymol       Date:  2015-07-17       Impact factor: 1.600

  3 in total

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