Literature DB >> 8535242

Design and structural analysis of an engineered thermostable chicken lysozyme.

P Shih1, J F Kirsch.   

Abstract

A hyperstable (hs) variant of chicken egg-white lysozyme with enhanced thermal (delta Tm approximately +10.5 degrees C) and chemical (delta Cm for guanidine hydrochloride denaturation = +1.3 M) stabilities relative to wild-type (WT) was constructed by combining several individual stabilizing substitutions. The free energy difference between the native and denatured states of the hs variant is 3.1 (GdnHCl, 25 degrees C) to 4.0 (differential scanning calorimetry, 74 degrees C) kcal mol-1 greater than that of WT. The specific activity of the hs variant is 2.5-fold greater than that of WT. The choice of mutations came from diverse sources: (1) The I55L/S91T core construct with delta Tm = 3.3 degrees C from WT was available from the accompanying study (Shih P, Holland DR, Kirsch JF, 1995, Protein Sci 4:2050-2062). (2) The A31V mutation was suggested by the better atomic packing in the human lysozyme structure where the Ala 31 equivalent is Leu. (3) The H15L and R114H substitutions were selected on the basis of sequence comparisons with pheasant lysozymes that are more stable than the chicken enzyme. (4) The D101S variant was identified from a screen of mutants previously prepared in this laboratory. The effects of the individual mutations on stability are cumulative and nearly additive.

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Year:  1995        PMID: 8535242      PMCID: PMC2142986          DOI: 10.1002/pro.5560041011

Source DB:  PubMed          Journal:  Protein Sci        ISSN: 0961-8368            Impact factor:   6.725


  44 in total

1.  pKa's of ionizable groups in proteins: atomic detail from a continuum electrostatic model.

Authors:  D Bashford; M Karplus
Journal:  Biochemistry       Date:  1990-11-06       Impact factor: 3.162

2.  Hydrophobic packing in T4 lysozyme probed by cavity-filling mutants.

Authors:  M Karpusas; W A Baase; M Matsumura; B W Matthews
Journal:  Proc Natl Acad Sci U S A       Date:  1989-11       Impact factor: 11.205

3.  Effect of active site residues in barnase on activity and stability.

Authors:  E M Meiering; L Serrano; A R Fersht
Journal:  J Mol Biol       Date:  1992-06-05       Impact factor: 5.469

4.  High-resolution mapping of the HyHEL-10 epitope of chicken lysozyme by site-directed mutagenesis.

Authors:  L N Kam-Morgan; S J Smith-Gill; M G Taylor; L Zhang; A C Wilson; J F Kirsch
Journal:  Proc Natl Acad Sci U S A       Date:  1993-05-01       Impact factor: 11.205

5.  Reverse hydrophobic effects relieved by amino-acid substitutions at a protein surface.

Authors:  A A Pakula; R T Sauer
Journal:  Nature       Date:  1990-03-22       Impact factor: 49.962

6.  Engineering protein thermal stability. Sequence statistics point to residue substitutions in alpha-helices.

Authors:  L Menéndez-Arias; P Argos
Journal:  J Mol Biol       Date:  1989-03-20       Impact factor: 5.469

7.  Enhanced protein thermostability from designed mutations that interact with alpha-helix dipoles.

Authors:  H Nicholson; W J Becktel; B W Matthews
Journal:  Nature       Date:  1988-12-15       Impact factor: 49.962

Review 8.  What's new in lysozyme research? Always a model system, today as yesterday.

Authors:  P Jollès; J Jollès
Journal:  Mol Cell Biochem       Date:  1984-09       Impact factor: 3.396

9.  Effects of subsite alterations on substrate-binding mode in the active site of hen egg-white lysozyme.

Authors:  I Kumagai; K Maenaka; F Sunada; S Takeda; K Miura
Journal:  Eur J Biochem       Date:  1993-02-15

10.  The (i, i + 4) Phe-His interaction studied in an alanine-based alpha-helix.

Authors:  K M Armstrong; R Fairman; R L Baldwin
Journal:  J Mol Biol       Date:  1993-03-05       Impact factor: 5.469

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  10 in total

1.  Prediction of protein thermostability with a direction- and distance-dependent knowledge-based potential.

Authors:  Christian Hoppe; Dietmar Schomburg
Journal:  Protein Sci       Date:  2005-09-09       Impact factor: 6.725

2.  Insights into protein-polysorbate interactions analysed by means of isothermal titration and differential scanning calorimetry.

Authors:  Claudia Hoffmann; Alfred Blume; Inge Miller; Patrick Garidel
Journal:  Eur Biophys J       Date:  2009-02-03       Impact factor: 1.733

3.  Point mutation Arg153-His at surface of Bacillus lipase contributing towards increased thermostability and ester synthesis: insight into molecular network.

Authors:  Nisha Chopra; Jagdeep Kaur
Journal:  Mol Cell Biochem       Date:  2017-10-30       Impact factor: 3.396

4.  Potential use of additivity of mutational effects in simplifying protein engineering.

Authors:  M M Skinner; T C Terwilliger
Journal:  Proc Natl Acad Sci U S A       Date:  1996-10-01       Impact factor: 11.205

5.  Molecular Characterization of Thermostable Newcastle disease virus Isolated from Pigeon.

Authors:  A Uthrakumar; K Vijayarani; K Kumanan; V Thiagarajan
Journal:  Indian J Virol       Date:  2013-01-29

6.  Design of highly stable functional GroEL minichaperones.

Authors:  Q Wang; A M Buckle; N W Foster; C M Johnson; A R Fersht
Journal:  Protein Sci       Date:  1999-10       Impact factor: 6.725

7.  Sulfolobus acidocaldarius inorganic pyrophosphatase: structure, thermostability, and effect of metal ion in an archael pyrophosphatase.

Authors:  V M Leppänen; H Nummelin; T Hansen; R Lahti; G Schäfer; A Goldman
Journal:  Protein Sci       Date:  1999-06       Impact factor: 6.725

8.  Semirational design of active tumor suppressor p53 DNA binding domain with enhanced stability.

Authors:  P V Nikolova; J Henckel; D P Lane; A R Fersht
Journal:  Proc Natl Acad Sci U S A       Date:  1998-12-08       Impact factor: 11.205

9.  Enhancing the thermal tolerance and gastric performance of a microbial phytase for use as a phosphate-mobilizing monogastric-feed supplement.

Authors:  James B Garrett; Keith A Kretz; Eileen O'Donoghue; Janne Kerovuo; William Kim; Nelson R Barton; Geoffrey P Hazlewood; Jay M Short; Dan E Robertson; Kevin A Gray
Journal:  Appl Environ Microbiol       Date:  2004-05       Impact factor: 4.792

10.  Estimation of Hydrogen-Exchange Protection Factors from MD Simulation Based on Amide Hydrogen Bonding Analysis.

Authors:  In-Hee Park; John D Venable; Caitlin Steckler; Susan E Cellitti; Scott A Lesley; Glen Spraggon; Ansgar Brock
Journal:  J Chem Inf Model       Date:  2015-08-20       Impact factor: 4.956

  10 in total

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