Literature DB >> 10548065

Design of highly stable functional GroEL minichaperones.

Q Wang1, A M Buckle, N W Foster, C M Johnson, A R Fersht.   

Abstract

GroEL minichaperones have potential in the biotechnology industry for the refolding of recombinant proteins. With the aim of enhancing and widening their use, we have created two highly stable functional variants of minichaperone GroEL(193-345). A sequence alignment of 130 members of the chaperonin 60 (Cpn60) family was used to design 37 single mutations. Two small-to-large mutations, A223T, A223V and one similar-size mutation, M233L, all located in the hydrophobic core were found to stabilize the protein by more than 1 kcal mol(-1) each. Six stabilizing mutations were combined, yielding two multiple mutants that were 6.99 and 6.15 kcal mol(-1) more stable than wild-type protein. Even though some of the substituted residue pairs are close to each other in the protein structure, the energetic effects of mutation are approximately additive. In particular, the stabilizing substitution A223T is unexpected and would have been missed by purely structural analysis. In the light of previously reported successes employing similar methods with several other proteins, our results show that a homology based approach is a simple and efficient method of increasing the stability of a protein.

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Year:  1999        PMID: 10548065      PMCID: PMC2144126          DOI: 10.1110/ps.8.10.2186

Source DB:  PubMed          Journal:  Protein Sci        ISSN: 0961-8368            Impact factor:   6.725


  45 in total

1.  Oxidative refolding chromatography: folding of the scorpion toxin Cn5.

Authors:  M M Altamirano; C García; L D Possani; A R Fersht
Journal:  Nat Biotechnol       Date:  1999-02       Impact factor: 54.908

2.  Structural and energetic consequences of disruptive mutations in a protein core.

Authors:  W A Lim; D C Farruggio; R T Sauer
Journal:  Biochemistry       Date:  1992-05-05       Impact factor: 3.162

3.  Redesigning the hydrophobic core of a four-helix-bundle protein.

Authors:  M Munson; R O'Brien; J M Sturtevant; L Regan
Journal:  Protein Sci       Date:  1994-11       Impact factor: 6.725

4.  Conformational variability in the refined structure of the chaperonin GroEL at 2.8 A resolution.

Authors:  K Braig; P D Adams; A T Brünger
Journal:  Nat Struct Biol       Date:  1995-12

5.  Thermodynamic stability and folding of GroEL minichaperones.

Authors:  R Golbik; R Zahn; S E Harding; A R Fersht
Journal:  J Mol Biol       Date:  1998-02-20       Impact factor: 5.469

6.  Chaperone activity and structure of monomeric polypeptide binding domains of GroEL.

Authors:  R Zahn; A M Buckle; S Perrett; C M Johnson; F J Corrales; R Golbik; A R Fersht
Journal:  Proc Natl Acad Sci U S A       Date:  1996-12-24       Impact factor: 11.205

7.  Influence of interior packing and hydrophobicity on the stability of a protein.

Authors:  W S Sandberg; T C Terwilliger
Journal:  Science       Date:  1989-07-07       Impact factor: 47.728

8.  Homologous plant and bacterial proteins chaperone oligomeric protein assembly.

Authors:  S M Hemmingsen; C Woolford; S M van der Vies; K Tilly; D T Dennis; C P Georgopoulos; R W Hendrix; R J Ellis
Journal:  Nature       Date:  1988-05-26       Impact factor: 49.962

9.  Hydrogen bonding stabilizes globular proteins.

Authors:  J K Myers; C N Pace
Journal:  Biophys J       Date:  1996-10       Impact factor: 4.033

10.  Contribution of buried hydrogen bonds to protein stability. The crystal structures of two barnase mutants.

Authors:  Y W Chen; A R Fersht; K Henrick
Journal:  J Mol Biol       Date:  1993-12-20       Impact factor: 5.469

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  15 in total

1.  The design of a hyperstable mutant of the Abp1p SH3 domain by sequence alignment analysis.

Authors:  A Rath; A R Davidson
Journal:  Protein Sci       Date:  2000-12       Impact factor: 6.725

2.  Increasing protein stability using a rational approach combining sequence homology and structural alignment: Stabilizing the WW domain.

Authors:  X Jiang; J Kowalski; J W Kelly
Journal:  Protein Sci       Date:  2001-07       Impact factor: 6.725

3.  Experimental evolution of a green fluorescent protein composed of 19 unique amino acids without tryptophan.

Authors:  Akio Kawahara-Kobayashi; Mitsuhiro Hitotsuyanagi; Kazuaki Amikura; Daisuke Kiga
Journal:  Orig Life Evol Biosph       Date:  2014-11-16       Impact factor: 1.950

4.  Bioinformatic method for protein thermal stabilization by structural entropy optimization.

Authors:  Euiyoung Bae; Ryan M Bannen; George N Phillips
Journal:  Proc Natl Acad Sci U S A       Date:  2008-07-08       Impact factor: 11.205

5.  Consensus protein engineering on the thermostable histone-like bacterial protein HUs significantly improves stability and DNA binding affinity.

Authors:  Anastasios Georgoulis; Maria Louka; Stratos Mylonas; Philemon Stavros; George Nounesis; Constantinos E Vorgias
Journal:  Extremophiles       Date:  2020-01-24       Impact factor: 2.395

6.  Surface residues and nonadditive interactions stabilize a consensus homeodomain protein.

Authors:  Matt Sternke; Katherine W Tripp; Doug Barrick
Journal:  Biophys J       Date:  2021-10-30       Impact factor: 4.033

7.  The use of consensus sequence information to engineer stability and activity in proteins.

Authors:  Matt Sternke; Katherine W Tripp; Doug Barrick
Journal:  Methods Enzymol       Date:  2020-07-17       Impact factor: 1.600

8.  Rational design of a novel calcium-binding site adjacent to the ligand-binding site on CD2 increases its CD48 affinity.

Authors:  Lisa M Jones; Wei Yang; Anna W Maniccia; Alice Harrison; P Anton van der Merwe; Jenny J Yang
Journal:  Protein Sci       Date:  2008-03       Impact factor: 6.725

9.  Structural and dynamic properties that govern the stability of an engineered fibronectin type III domain.

Authors:  Benjamin T Porebski; Adrian A Nickson; David E Hoke; Morag R Hunter; Liguang Zhu; Sheena McGowan; Geoffrey I Webb; Ashley M Buckle
Journal:  Protein Eng Des Sel       Date:  2015-03       Impact factor: 1.650

Review 10.  Consensus protein design.

Authors:  Benjamin T Porebski; Ashley M Buckle
Journal:  Protein Eng Des Sel       Date:  2016-06-05       Impact factor: 1.650

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