Literature DB >> 8506324

Perturbations of the distal heme pocket in human myoglobin mutants probed by infrared spectroscopy of bound CO: correlation with ligand binding kinetics.

S Balasubramanian1, D G Lambright, S G Boxer.   

Abstract

The infrared spectra of CO bound to human myoglobin and myoglobin mutants at positions His-64, Val-68, Asp-60, and Lys-45 on the distal side have been measured between 100 and 300 K. Large differences are observed with mutations at His-64 and Val-68 as well as with temperature and pH. Although distal His-64 is found to affect CO bonding, Val-68 also plays a major role. The variations are analyzed qualitatively in terms of a simple model involving steric interaction between the bound CO and the distal residues. A strong correlation is found between the final barrier height to CO recombination and the CO stretch frequency: as compared to wild type, the barrier is smaller in those mutants that have a higher CO stretch frequency (vCO) and vice versa. Possible reasons for this correlation are discussed. It is emphasized that the temperature and pH dependence of both the kinetics and the infrared spectra must be measured to obtain a consistent picture.

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Year:  1993        PMID: 8506324      PMCID: PMC46584          DOI: 10.1073/pnas.90.10.4718

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  35 in total

1.  CO recombination to human myoglobin mutants in glycerol-water solutions.

Authors:  S Balasubramanian; D G Lambright; M C Marden; S G Boxer
Journal:  Biochemistry       Date:  1993-03-09       Impact factor: 3.162

2.  Structure of myoglobin refined at 2-0 A resolution. II. Structure of deoxymyoglobin from sperm whale.

Authors:  T Takano
Journal:  J Mol Biol       Date:  1977-03-05       Impact factor: 5.469

3.  Nanosecond flash photolysis study of carbon monoxide binding to the beta chain of hemoglobin Zürich [beta 63(E7)His leads to Arg].

Authors:  D D Dlott; H Frauenfelder; P Langer; H Roder; E E DiIorio
Journal:  Proc Natl Acad Sci U S A       Date:  1983-10       Impact factor: 11.205

4.  CO and O2 complexes of soybean leghemoglobins: pH effects upon infrared and visible spectra. Comparisons with CO and O2 complexes of myoglobin and hemoglobin.

Authors:  W H Fuchsman; C A Appleby
Journal:  Biochemistry       Date:  1979-04-03       Impact factor: 3.162

5.  Dynamics of ligand binding to myoglobin.

Authors:  R H Austin; K W Beeson; L Eisenstein; H Frauenfelder; I C Gunsalus
Journal:  Biochemistry       Date:  1975-12-02       Impact factor: 3.162

6.  Infrared spectroscopy of photodissociated carboxymyoglobin at low temperatures.

Authors:  J O Alben; D Beece; S F Bowne; W Doster; L Eisenstein; H Frauenfelder; D Good; J D McDonald; M C Marden; P P Moh; L Reinisch; A H Reynolds; E Shyamsunder; K T Yue
Journal:  Proc Natl Acad Sci U S A       Date:  1982-06       Impact factor: 11.205

7.  Carbon monoxide binding to iron porphyrins.

Authors:  J P Collman; J I Brauman; K M Doxsee
Journal:  Proc Natl Acad Sci U S A       Date:  1979-12       Impact factor: 11.205

8.  Structure of carboxymyoglobin in crystals and in solution.

Authors:  M W Makinen; R A Houtchens; W S Caughey
Journal:  Proc Natl Acad Sci U S A       Date:  1979-12       Impact factor: 11.205

9.  Dynamic protein structures. Effects of pH on conformer stabilities at the ligand-binding site of bovine heart myoglobin carbonyl.

Authors:  H Shimada; W S Caughey
Journal:  J Biol Chem       Date:  1982-10-25       Impact factor: 5.157

10.  Stereochemistry of carbonylmetalloporphyrins. The structure of (pyridine)(carbonyl)(5, 10, 15, 20-tetraphenylprophinato)iron(II).

Authors:  S M Peng; J A Ibers
Journal:  J Am Chem Soc       Date:  1976-12-08       Impact factor: 15.419

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  11 in total

1.  Ligand migration and binding in the dimeric hemoglobin of Scapharca inaequivalvis.

Authors:  Karin Nienhaus; James E Knapp; Pasquale Palladino; William E Royer; G Ulrich Nienhaus
Journal:  Biochemistry       Date:  2007-11-15       Impact factor: 3.162

2.  Photolysis of Hi-CO Nitrogenase - Observation of a Plethora of Distinct CO Species using Infrared Spectroscopy.

Authors:  Lifen Yan; Christie H Dapper; Simon J George; Hongxin Wang; Devrani Mitra; Weibing Dong; William E Newton; Stephen P Cramer
Journal:  Eur J Inorg Chem       Date:  2011-03-28       Impact factor: 2.524

3.  Theoretical study of the electrostatic and steric effects on the spectroscopic characteristics of the metal-ligand unit of heme proteins. 2. C-O vibrational frequencies, 17O isotropic chemical shifts, and nuclear quadrupole coupling constants.

Authors:  B Kushkuley; S S Stavrov
Journal:  Biophys J       Date:  1997-02       Impact factor: 4.033

4.  Effect of Occluded Ligand Migration on the Kinetics and Structural Dynamics of Homodimeric Hemoglobin.

Authors:  Hanui Kim; Jong Goo Kim; Srinivasan Muniyappan; Tae Wu Kim; Sang Jin Lee; Hyotcherl Ihee
Journal:  J Phys Chem B       Date:  2020-02-19       Impact factor: 2.991

5.  Structural and spectroscopic studies of azide complexes of horse heart myoglobin and the His-64-->Thr variant.

Authors:  R Maurus; R Bogumil; N T Nguyen; A G Mauk; G Brayer
Journal:  Biochem J       Date:  1998-05-15       Impact factor: 3.857

6.  Distal residue-CO interaction in carbonmonoxy myoglobins: a molecular dynamics study of three distal mutants.

Authors:  P Jewsbury; T Kitagawa
Journal:  Biophys J       Date:  1995-04       Impact factor: 4.033

7.  Connection between the taxonomic substates and protonation of histidines 64 and 97 in carbonmonoxy myoglobin.

Authors:  J D Müller; B H McMahon; E Y Chien; S G Sligar; G U Nienhaus
Journal:  Biophys J       Date:  1999-08       Impact factor: 4.033

8.  The structure and NO binding properties of the nitrophorin-like heme-binding protein from Arabidopsis thaliana gene locus At1g79260.1.

Authors:  Christopher M Bianchetti; George C Blouin; Eduard Bitto; John S Olson; George N Phillips
Journal:  Proteins       Date:  2010-03

9.  DFT analysis of axial and equatorial effects on heme-CO vibrational modes: applications to CooA and H-NOX heme sensor proteins.

Authors:  Changliang Xu; Mohammed Ibrahim; Thomas G Spiro
Journal:  Biochemistry       Date:  2008-01-25       Impact factor: 3.162

10.  Theoretical study of the distal-side steric and electrostatic effects on the vibrational characteristics of the FeCO unit of the carbonylheme proteins and their models.

Authors:  B Kushkuley; S S Stavrov
Journal:  Biophys J       Date:  1996-03       Impact factor: 4.033

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