Literature DB >> 8441648

DNA sequences at immunoglobulin switch region recombination sites.

W Dunnick1, G Z Hertz, L Scappino, C Gritzmacher.   

Abstract

The immunoglobulin heavy chain switch from synthesis of IgM to IgG, IgA or IgE is mediated by a DNA recombination event. Recombination occurs within switch regions, 2-10 kb segments of DNA that lie upstream of heavy chain constant region genes. A compilation of DNA sequences at more than 150 recombination sites within heavy chain switch regions is presented. Switch recombination does not appear to occur by homologous recombination. An extensive search for a recognition motif failed to find such a sequence, implying that switch recombination is not a site-specific event. A model for switch recombination that involves illegitimate priming of one switch region on another, followed by error-prone DNA synthesis, is proposed.

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Year:  1993        PMID: 8441648      PMCID: PMC309126          DOI: 10.1093/nar/21.3.365

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  63 in total

1.  Sequences of human immunoglobulin switch regions: implications for recombination and transcription.

Authors:  F C Mills; J S Brooker; R D Camerini-Otero
Journal:  Nucleic Acids Res       Date:  1990-12-25       Impact factor: 16.971

2.  Packaging of the bacteriophage lambda chromosome: effect of chromosome length.

Authors:  M Feiss; R A Fisher; M A Crayton; C Egner
Journal:  Virology       Date:  1977-03       Impact factor: 3.616

3.  DNA sequences mediating class switching in alpha-immunoglobulins.

Authors:  M M Davis; S K Kim; L E Hood
Journal:  Science       Date:  1980-09-19       Impact factor: 47.728

4.  Two types of somatic recombination are necessary for the generation of complete immunoglobulin heavy-chain genes.

Authors:  H Sakano; R Maki; Y Kurosawa; W Roeder; S Tonegawa
Journal:  Nature       Date:  1980-08-14       Impact factor: 49.962

5.  An immunoglobulin deletion mutant with implications for the heavy-chain switch and RNA splicing.

Authors:  W Dunnick; T H Rabbitts; C Milstein
Journal:  Nature       Date:  1980-08-14       Impact factor: 49.962

6.  Rearrangement of immunoglobulin gamma 1-chain gene and mechanism for heavy-chain class switch.

Authors:  T Kataoka; T Kawakami; N Takahashi; T Honjo
Journal:  Proc Natl Acad Sci U S A       Date:  1980-02       Impact factor: 11.205

7.  Monoclonal dinitrophenyl-specific murine IgE antibody: preparation, isolation, and characterization.

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Journal:  J Immunol       Date:  1980-06       Impact factor: 5.422

8.  Isotype switching of an immunoglobulin heavy chain transgene occurs by DNA recombination between different chromosomes.

Authors:  R M Gerstein; W N Frankel; C L Hsieh; J M Durdik; S Rath; J M Coffin; A Nisonoff; E Selsing
Journal:  Cell       Date:  1990-11-02       Impact factor: 41.582

9.  Immunoglobulin switch circular DNA in the mouse infected with Nippostrongylus brasiliensis: evidence for successive class switching from mu to epsilon via gamma 1.

Authors:  K Yoshida; M Matsuoka; S Usuda; A Mori; K Ishizaka; H Sakano
Journal:  Proc Natl Acad Sci U S A       Date:  1990-10       Impact factor: 11.205

10.  DNA sequencing with chain-terminating inhibitors.

Authors:  F Sanger; S Nicklen; A R Coulson
Journal:  Proc Natl Acad Sci U S A       Date:  1977-12       Impact factor: 11.205

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  102 in total

1.  Transcription-dependent R-loop formation at mammalian class switch sequences.

Authors:  R B Tracy; M R Lieber
Journal:  EMBO J       Date:  2000-03-01       Impact factor: 11.598

Review 2.  Immunoglobulin class switch recombination: will genetics provide new clues to mechanism?

Authors:  N Maizels
Journal:  Am J Hum Genet       Date:  1999-05       Impact factor: 11.025

3.  Transcriptional activation by LR1 at the Emu enhancer and switch region sites.

Authors:  L A Hanakahi; N Maizels
Journal:  Nucleic Acids Res       Date:  2000-07-15       Impact factor: 16.971

4.  Variable deletion and duplication at recombination junction ends: implication for staggered double-strand cleavage in class-switch recombination.

Authors:  X Chen; K Kinoshita; T Honjo
Journal:  Proc Natl Acad Sci U S A       Date:  2001-11-20       Impact factor: 11.205

5.  Two new isotype-specific switching activities detected for Ig class switching.

Authors:  Limei Ma; Henry H Wortis; Amy L Kenter
Journal:  J Immunol       Date:  2002-03-15       Impact factor: 5.422

6.  Sp1 binds to the precise locus of end processing within the terminal repeats of Epstein-Barr virus DNA.

Authors:  R Sun; T A Spain; S F Lin; G Miller
Journal:  J Virol       Date:  1997-08       Impact factor: 5.103

7.  Intracellular transcription of G-rich DNAs induces formation of G-loops, novel structures containing G4 DNA.

Authors:  Michelle L Duquette; Priya Handa; Jack A Vincent; Andrew F Taylor; Nancy Maizels
Journal:  Genes Dev       Date:  2004-07-01       Impact factor: 11.361

8.  Initiation of Epstein-Barr virus lytic replication requires transcription and the formation of a stable RNA-DNA hybrid molecule at OriLyt.

Authors:  Andrew J Rennekamp; Paul M Lieberman
Journal:  J Virol       Date:  2010-12-29       Impact factor: 5.103

9.  Genome-wide prediction of G4 DNA as regulatory motifs: role in Escherichia coli global regulation.

Authors:  Pooja Rawal; Veera Bhadra Rao Kummarasetti; Jinoy Ravindran; Nirmal Kumar; Kangkan Halder; Rakesh Sharma; Mitali Mukerji; Swapan Kumar Das; Shantanu Chowdhury
Journal:  Genome Res       Date:  2006-05       Impact factor: 9.043

10.  Mutations occur in the Ig Smu region but rarely in Sgamma regions prior to class switch recombination.

Authors:  Carol E Schrader; Sean P Bradley; Joycelyn Vardo; Sofia N Mochegova; Erin Flanagan; Janet Stavnezer
Journal:  EMBO J       Date:  2003-11-03       Impact factor: 11.598

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