Literature DB >> 7937074

Effect of site-specific modification on restriction endonucleases and DNA modification methyltransferases.

M McClelland1, M Nelson, E Raschke.   

Abstract

Restriction endonucleases have site-specific interactions with DNA that can often be inhibited by site-specific DNA methylation and other site-specific DNA modifications. However, such inhibition cannot generally be predicted. The empirically acquired data on these effects are tabulated for over 320 restriction endonucleases. In addition, a table of known site-specific DNA modification methyltransferases and their specificities is presented along with EMBL database accession numbers for cloned genes.

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Year:  1994        PMID： 7937074      PMCID： PMC308336          DOI： 10.1093/nar/22.17.3640

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN： 0305-1048            Impact factor:   16.971


  287 in total

1.  Alteration of apparent restriction endonuclease recognition specificities by DNA methylases.

Authors:  M Nelson; C Christ; I Schildkraut
Journal:  Nucleic Acids Res       Date:  1984-07-11       Impact factor: 16.971

2.  The organization and complete nucleotide sequence of the PstI restriction-modification system.

Authors:  R Y Walder; J A Walder; J E Donelson
Journal:  J Biol Chem       Date:  1984-06-25       Impact factor: 5.157

3.  Site-specific cleavage of DNA at 8- and 10-base-pair sequences.

Authors:  M McClelland; L G Kessler; M Bittner
Journal:  Proc Natl Acad Sci U S A       Date:  1984-02       Impact factor: 11.205

4.  Characterization of the genes coding for the Eco RV restriction and modification system of Escherichia coli.

Authors:  L Bougueleret; M Schwarzstein; A Tsugita; M Zabeau
Journal:  Nucleic Acids Res       Date:  1984-04-25       Impact factor: 16.971

Review 5.  DNA methyltransferases of Bacillus subtilis and its bacteriophages.

Authors:  U Günthert; T A Trautner
Journal:  Curr Top Microbiol Immunol       Date:  1984       Impact factor: 4.291

6.  Cloning in Streptococcus pneumoniae of the gene for DpnII DNA methylase.

Authors:  S A Lacks; S S Springhorn
Journal:  J Bacteriol       Date:  1984-03       Impact factor: 3.490

7.  Selective protection of 5' ... GGCC ... 3' and 5' ... GCNGC ... 3' sequences by the hypermodified oxopyrimidine in Bacillus subtilis bacteriophage SP10 DNA.

Authors:  C L Wiatr; H J Witmer
Journal:  J Virol       Date:  1984-10       Impact factor: 5.103

8.  Restriction and modification in Bacillus subtilis: nucleotide sequence, functional organization and product of the DNA methyltransferase gene of bacteriophage SPR.

Authors:  H J Buhk; B Behrens; R Tailor; K Wilke; J J Prada; U Günthert; M Noyer-Weidner; S Jentsch; T A Trautner
Journal:  Gene       Date:  1984 Jul-Aug       Impact factor: 3.688

9.  Genetic recombination can generate altered restriction specificity.

Authors:  F V Fuller-Pace; L R Bullas; H Delius; N E Murray
Journal:  Proc Natl Acad Sci U S A       Date:  1984-10       Impact factor: 11.205

10.  Sequence specificity of isolated DNA-cytosine methylases from Shigella sonnei 47 cells.

Authors:  I I Nikolskaya; N G Lopatina; S V Suchkov; I M Kartashova; S S Debov
Journal:  Biochem Int       Date:  1984-12
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  119 in total

1.  Specificities of eleven different DNA methyltransferases of Helicobacter pylori strain 26695.

Authors:  J Vitkute; K Stankevicius; G Tamulaitiene; Z Maneliene; A Timinskas; D E Berg; A Janulaitis
Journal:  J Bacteriol       Date:  2001-01       Impact factor: 3.490

2.  The use of competitive PCR mimic to evaluate a Limulus lambda phage genomic DNA library.

Authors:  Y Wang; Z Cao; E A Reid; R F Newkirk; M T Ivy; J G Townsel
Journal:  Cell Mol Neurobiol       Date:  2000-08       Impact factor: 5.046

3.  Sequence elimination and cytosine methylation are rapid and reproducible responses of the genome to wide hybridization and allopolyploidy in wheat.

Authors:  H Shaked; K Kashkush; H Ozkan; M Feldman; A A Levy
Journal:  Plant Cell       Date:  2001-08       Impact factor: 11.277

4.  Vibrio cholerae phage K139: complete genome sequence and comparative genomics of related phages.

Authors:  Dagmar Kapfhammer; Julia Blass; Stefan Evers; Joachim Reidl
Journal:  J Bacteriol       Date:  2002-12       Impact factor: 3.490

5.  REBASE: restriction enzymes and methyltransferases.

Authors:  Richard J Roberts; Tamas Vincze; Janos Posfai; Dana Macelis
Journal:  Nucleic Acids Res       Date:  2003-01-01       Impact factor: 16.971

6.  The recognition and modification sites for the bacterial type I restriction systems KpnAI, StySEAI, StySENI and StySGI.

Authors:  Julie K A Kasarjian; Masumi Hidaka; Takashi Horiuchi; Masatake Iida; Junichi Ryu
Journal:  Nucleic Acids Res       Date:  2004-06-15       Impact factor: 16.971

7.  Activation of a rice endogenous retrotransposon Tos17 in tissue culture is accompanied by cytosine demethylation and causes heritable alteration in methylation pattern of flanking genomic regions.

Authors:  Z L Liu; F P Han; M Tan; X H Shan; Y Z Dong; X Z Wang; G Fedak; S Hao; Bao Liu
Journal:  Theor Appl Genet       Date:  2004-04-08       Impact factor: 5.699

8.  QTL mapping of internal heat necrosis in tetraploid potato.

Authors:  P H McCord; B R Sosinski; K G Haynes; M E Clough; G C Yencho
Journal:  Theor Appl Genet       Date:  2010-08-28       Impact factor: 5.699

Review 9.  Twenty years hunting for sulfur in DNA.

Authors:  Shi Chen; Lianrong Wang; Zixin Deng
Journal:  Protein Cell       Date:  2010-02-07       Impact factor: 14.870

10.  CBF2A-CBF4B genomic region copy numbers alongside the circadian clock play key regulatory mechanisms driving expression of FR-H2 CBFs.

Authors:  Taniya Dhillon; Kengo Morohashi; Eric J Stockinger
Journal:  Plant Mol Biol       Date:  2017-04-22       Impact factor: 4.076
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