Literature DB >> 7647552

High-level 2H/13C/15N labeling of proteins for NMR studies.

R A Venters1, C C Huang, B T Farmer, R Trolard, L D Spicer, C A Fierke.   

Abstract

The protein human carbonic anhydrase II (HCA II) has been isotopically labeled with 2H, 13C and 15N for high-resolution NMR assignment studies and pulse sequence development. To increase the sensitivity of several key 1H/13C/15N triple-resonance correlation experiments, 2H has been incorporated into HCA II in order to decrease the rates of 13C and 1HN T2 relaxation. NMR quantities of protein with essentially complete aliphatic 2H incorporation have been obtained by growth of E. coli in defined media containing D2O, [1,2-13C2, 99%] sodium acetate, and [15N, 99%] ammonium chloride. Complete aliphatic deuterium enrichment is optimal for 13C and 15N backbone NMR assignment studies, since the 13C and 1HN T2 relaxation times and, therefore, sensitivity are maximized. In addition, complete aliphatic deuteration increases both resolution and sensitivity by eliminating the differential 2H isotopic shift observed for partially deuterated CHnDm moieties.

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Year:  1995        PMID: 7647552     DOI: 10.1007/bf00182275

Source DB:  PubMed          Journal:  J Biomol NMR        ISSN: 0925-2738            Impact factor:   2.835


  12 in total

1.  The effect of selective deuteration on magnetization transfer in larger proteins.

Authors:  R Pachter; C H Arrowsmith; O Jardetzky
Journal:  J Biomol NMR       Date:  1992-03       Impact factor: 2.835

2.  (1)H, (13)C and (15)N NMR backbone assignments of the 269-residue serine protease PB92 from Bacillus alcalophilus.

Authors:  R H Fogh; D Schipper; R Boelens; R Kaptein
Journal:  J Biomol NMR       Date:  1994-01       Impact factor: 2.835

3.  Denaturation and reactivation of human carbonic anhydrases in guanidine hydrochloride and urea.

Authors:  U Carlsson; L E Henderson; S Lindskog
Journal:  Biochim Biophys Acta       Date:  1973-06-15

4.  Esterase activities of human carbonic anhydrases B and C.

Authors:  J A Verpoorte; S Mehta; J T Edsall
Journal:  J Biol Chem       Date:  1967-09-25       Impact factor: 5.157

5.  Crystal structure of human carbonic anhydrase C.

Authors:  A Liljas; K K Kannan; P C Bergstén; I Waara; K Fridborg; B Strandberg; U Carlbom; L Järup; S Lövgren; M Petef
Journal:  Nat New Biol       Date:  1972-02-02

6.  Carbon-13 nuclear magnetic resonance probe of active-site ionizations in human carbonic anhydrase B.

Authors:  R G Khalifah; D J Strader; S H Bryant; S M Gibson
Journal:  Biochemistry       Date:  1977-05-17       Impact factor: 3.162

7.  Altering the mouth of a hydrophobic pocket. Structure and kinetics of human carbonic anhydrase II mutants at residue Val-121.

Authors:  S K Nair; T L Calderone; D W Christianson; C A Fierke
Journal:  J Biol Chem       Date:  1991-09-15       Impact factor: 5.157

8.  Uniform 13C isotope labeling of proteins with sodium acetate for NMR studies: application to human carbonic anhydrase II.

Authors:  R A Venters; T L Calderone; L D Spicer; C A Fierke
Journal:  Biochemistry       Date:  1991-05-07       Impact factor: 3.162

9.  1H, 13C and 15N NMR backbone assignments and secondary structure of the 269-residue protease subtilisin 309 from Bacillus lentus.

Authors:  M L Remerowski; T Domke; A Groenewegen; H A Pepermans; C W Hilbers; F J van de Ven
Journal:  J Biomol NMR       Date:  1994-03       Impact factor: 2.835

10.  A novel approach for sequential assignment of 1H, 13C, and 15N spectra of proteins: heteronuclear triple-resonance three-dimensional NMR spectroscopy. Application to calmodulin.

Authors:  M Ikura; L E Kay; A Bax
Journal:  Biochemistry       Date:  1990-05-15       Impact factor: 3.162

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  37 in total

1.  De novo protein structure determination using sparse NMR data.

Authors:  P M Bowers; C E Strauss; D Baker
Journal:  J Biomol NMR       Date:  2000-12       Impact factor: 2.835

2.  Three-dimensional domain swapping in the folded and molten-globule states of cystatins, an amyloid-forming structural superfamily.

Authors:  R A Staniforth; S Giannini; L D Higgins; M J Conroy; A M Hounslow; R Jerala; C J Craven; J P Waltho
Journal:  EMBO J       Date:  2001-09-03       Impact factor: 11.598

3.  Improving the accuracy of NMR structures of large proteins using pseudocontact shifts as long-range restraints.

Authors:  Vadim Gaponenko; Siddhartha P Sarma; Amanda S Altieri; David A Horita; Jess Li; R Andrew Byrd
Journal:  J Biomol NMR       Date:  2004-03       Impact factor: 2.835

4.  Role for NMR in structural genomics.

Authors:  Michael A Kennedy; Gaetano T Montelione; Cheryl H Arrowsmith; John L Markley
Journal:  J Struct Funct Genomics       Date:  2002

5.  DNA-repair protein hHR23a alters its protein structure upon binding proteasomal subunit S5a.

Authors:  Kylie J Walters; Patrycja J Lech; Amanda M Goh; Qinghua Wang; Peter M Howley
Journal:  Proc Natl Acad Sci U S A       Date:  2003-10-13       Impact factor: 11.205

6.  Determination of solution structures of proteins up to 40 kDa using CS-Rosetta with sparse NMR data from deuterated samples.

Authors:  Oliver F Lange; Paolo Rossi; Nikolaos G Sgourakis; Yifan Song; Hsiau-Wei Lee; James M Aramini; Asli Ertekin; Rong Xiao; Thomas B Acton; Gaetano T Montelione; David Baker
Journal:  Proc Natl Acad Sci U S A       Date:  2012-06-25       Impact factor: 11.205

7.  Fast-HMQC using Ernst angle pulses: An efficient tool for screening of ligand binding to target proteins.

Authors:  A Ross; M Salzmann; H Senn
Journal:  J Biomol NMR       Date:  1997-12       Impact factor: 2.835

8.  Recent Advances in the Application of Solution NMR Spectroscopy to Multi-Span Integral Membrane Proteins.

Authors:  Hak Jun Kim; Stanley C Howell; Wade D Van Horn; Young Ho Jeon; Charles R Sanders
Journal:  Prog Nucl Magn Reson Spectrosc       Date:  2009-11-01       Impact factor: 9.795

9.  Direct NMR observation of a substrate protein bound to the chaperonin GroEL.

Authors:  Reto Horst; Eric B Bertelsen; Jocelyne Fiaux; Gerhard Wider; Arthur L Horwich; Kurt Wüthrich
Journal:  Proc Natl Acad Sci U S A       Date:  2005-08-22       Impact factor: 11.205

10.  Efficient uniform isotope labeling of Abl kinase expressed in Baculovirus-infected insect cells.

Authors:  André Strauss; Francis Bitsch; Gabriele Fendrich; Patrick Graff; René Knecht; Bernd Meyhack; Wolfgang Jahnke
Journal:  J Biomol NMR       Date:  2005-04       Impact factor: 2.835

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