Literature DB >> 16641

Carbon-13 nuclear magnetic resonance probe of active-site ionizations in human carbonic anhydrase B.

R G Khalifah, D J Strader, S H Bryant, S M Gibson.   

Abstract

Human carbonic anhydrase B (HCAB), prepared by a new affinity chromatography procedure, was carboxymethylated exclusively at NT of its active-site histidine-200 using 90% [1-13C]bromoacetate. The 13C nuclear magnetic resonance signal of the covalently attached carboxylate was easily detected over the natural abundance background due to the other carbonyl and carboxyl carbons of this 29 000 molecular weight zinc metalloenzyme. Its chemical shift proved very sensitive to the presence of inhibitors in the active site and to variations in pH. Two perturbing groups with pKa values of 6.0 and 9.2 were assigned to the modified histidine-200 itself and the zinc-bound water ligand, respectively, making use of 13C NMR titration data on Nr- and Nr-carboxymethyl-L-histidine model compounds. The results rule out histidine-200 as the critical group whose ionization controls the catalytic activity. They also strongly suggest an interaction of the carboxylate of the carboxymethyl group with either the zinc or its water ligand around pH 8, possibly explaining the basis for the major differences between HCAB and CmHCAB.

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Year:  1977        PMID: 16641     DOI: 10.1021/bi00629a031

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  40 in total

1.  Comparison of electron paramagnetic resonance methods to determine distances between spin labels on human carbonic anhydrase II.

Authors:  M Persson; J R Harbridge; P Hammarström; R Mitri; L G Mårtensson; U Carlsson; G R Eaton; S S Eaton
Journal:  Biophys J       Date:  2001-06       Impact factor: 4.033

2.  Structure of a monoclinic polymorph of human carbonic anhydrase II with a doubled a axis.

Authors:  Arthur H Robbins; John F Domsic; Mavis Agbandje-McKenna; Robert McKenna
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2010-04-21

3.  Structure and catalysis by carbonic anhydrase II: role of active-site tryptophan 5.

Authors:  Rose Mikulski; John F Domsic; George Ling; Chingkuang Tu; Arthur H Robbins; David N Silverman; Robert McKenna
Journal:  Arch Biochem Biophys       Date:  2011-10-05       Impact factor: 4.013

4.  Dependence of effective molarity on linker length for an intramolecular protein-ligand system.

Authors:  Vijay M Krishnamurthy; Vincent Semetey; Paul J Bracher; Nan Shen; George M Whitesides
Journal:  J Am Chem Soc       Date:  2007-02-07       Impact factor: 15.419

Review 5.  Carbonic anhydrase as a model for biophysical and physical-organic studies of proteins and protein-ligand binding.

Authors:  Vijay M Krishnamurthy; George K Kaufman; Adam R Urbach; Irina Gitlin; Katherine L Gudiksen; Douglas B Weibel; George M Whitesides
Journal:  Chem Rev       Date:  2008-03       Impact factor: 60.622

6.  Using covalent dimers of human carbonic anhydrase II to model bivalency in immunoglobulins.

Authors:  Eric T Mack; Phillip W Snyder; Raquel Perez-Castillejos; George M Whitesides
Journal:  J Am Chem Soc       Date:  2011-07-07       Impact factor: 15.419

7.  Preliminary X-ray crystallographic analysis of α-carbonic anhydrase from Thiomicrospira crunogena XCL-2.

Authors:  Natalia Díaz Torres; Guillermo González; Shyamasri Biswas; Kathleen M Scott; Robert McKenna
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2012-08-30

8.  Structural and kinetic effects on changes in the CO(2) binding pocket of human carbonic anhydrase II.

Authors:  Dayne West; Chae Un Kim; Chingkuang Tu; Arthur H Robbins; Sol M Gruner; David N Silverman; Robert McKenna
Journal:  Biochemistry       Date:  2012-11-02       Impact factor: 3.162

9.  Location of binding sites in small molecule rescue of human carbonic anhydrase II.

Authors:  Deepa Bhatt; S Zoë Fisher; Chingkuang Tu; Robert McKenna; David N Silverman
Journal:  Biophys J       Date:  2006-10-27       Impact factor: 4.033

10.  High-level 2H/13C/15N labeling of proteins for NMR studies.

Authors:  R A Venters; C C Huang; B T Farmer; R Trolard; L D Spicer; C A Fierke
Journal:  J Biomol NMR       Date:  1995-06       Impact factor: 2.835

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