Literature DB >> 20859783

Fast-HMQC using Ernst angle pulses: An efficient tool for screening of ligand binding to target proteins.

A Ross1, M Salzmann, H Senn.   

Abstract

The application of Ernst angle pulses in multidimensional NMR spectroscopy is theoretically and experimentally investigated. Theory shows that only for a few pulse sequences employed at high repetition rate, a remarkable gain in sensitivity is possible using Ernst angle pulses. As an example, a new variant of the heteronuclear multiple quantum coherence (HMQC) experiment, the fast-((1)H,(15)N)-HMQC, is described. This sequence allows, with a 1 mM protein sample in H(2)O, the acquisition of a highly resolved two-dimensional ((1)H,(15)N) correlated spectrum within 37 s. The high efficiency of the fast-HMQC to detect ligand binding to a target protein is demonstrated.

Year:  1997        PMID: 20859783     DOI: 10.1023/A:1018361214472

Source DB:  PubMed          Journal:  J Biomol NMR        ISSN: 0925-2738            Impact factor:   2.835


  7 in total

1.  Discovering high-affinity ligands for proteins: SAR by NMR.

Authors:  S B Shuker; P J Hajduk; R P Meadows; S W Fesik
Journal:  Science       Date:  1996-11-29       Impact factor: 47.728

2.  Combinatorial peptide libraries: robotic synthesis and analysis by nuclear magnetic resonance, mass spectrometry, tandem mass spectrometry, and high-performance capillary electrophoresis techniques.

Authors:  J A Boutin; P Hennig; P H Lambert; S Bertin; L Petit; J P Mahieu; B Serkiz; J P Volland; J L Fauchère
Journal:  Anal Biochem       Date:  1996-02-15       Impact factor: 3.365

3.  Application of phase sensitive two-dimensional correlated spectroscopy (COSY) for measurements of 1H-1H spin-spin coupling constants in proteins.

Authors:  D Marion; K Wüthrich
Journal:  Biochem Biophys Res Commun       Date:  1983-06-29       Impact factor: 3.575

4.  High-level 2H/13C/15N labeling of proteins for NMR studies.

Authors:  R A Venters; C C Huang; B T Farmer; R Trolard; L D Spicer; C A Fierke
Journal:  J Biomol NMR       Date:  1995-06       Impact factor: 2.835

5.  Solution studies of staphylococcal nuclease H124L. 2. 1H, 13C, and 15N chemical shift assignments for the unligated enzyme and analysis of chemical shift changes that accompany formation of the nuclease-thymidine 3',5'-bisphosphate-calcium ternary complex.

Authors:  J F Wang; A P Hinck; S N Loh; D M LeMaster; J L Markley
Journal:  Biochemistry       Date:  1992-01-28       Impact factor: 3.162

6.  1H and 15N resonance assignments and secondary structure of cellular retinoic acid-binding protein with and without bound ligand.

Authors:  J Rizo; Z P Liu; L M Gierasch
Journal:  J Biomol NMR       Date:  1994-11       Impact factor: 2.835

7.  Gradient-tailored excitation for single-quantum NMR spectroscopy of aqueous solutions.

Authors:  M Piotto; V Saudek; V Sklenár
Journal:  J Biomol NMR       Date:  1992-11       Impact factor: 2.835

  7 in total
  9 in total

1.  Automation of NMR measurements and data evaluation for systematically screening interactions of small molecules with target proteins.

Authors:  A Ross; G Schlotterbeck; W Klaus; H Senn
Journal:  J Biomol NMR       Date:  2000-02       Impact factor: 2.835

2.  Alternate HMQC experiments for recording HN and HC-correlation spectra in proteins at high throughput.

Authors:  Luciano Mueller
Journal:  J Biomol NMR       Date:  2008-09-27       Impact factor: 2.835

3.  SOFAST-HMQC experiments for recording two-dimensional heteronuclear correlation spectra of proteins within a few seconds.

Authors:  Paul Schanda; Eriks Kupce; Bernhard Brutscher
Journal:  J Biomol NMR       Date:  2005-12       Impact factor: 2.835

4.  Enhancement of the steady-state magnetization in TROSY experiments.

Authors:  R Riek
Journal:  J Biomol NMR       Date:  2001-10       Impact factor: 2.835

5.  Development and application of aromatic [(13)C, (1)H] SOFAST-HMQC NMR experiment for nucleic acids.

Authors:  Bharathwaj Sathyamoorthy; Janghyun Lee; Isaac Kimsey; Laura R Ganser; Hashim Al-Hashimi
Journal:  J Biomol NMR       Date:  2014-09-04       Impact factor: 2.835

6.  Mapping the ligand binding site at protein side-chains in protein-ligand complexes through NOE difference spectroscopy.

Authors:  C Eichmüller; M Tollinger; B Kräutler; R Konrat
Journal:  J Biomol NMR       Date:  2001-07       Impact factor: 2.835

7.  Utilization of methyl proton resonances in cross-saturation measurement for determining the interfaces of large protein-protein complexes.

Authors:  Hideo Takahashi; Mayumi Miyazawa; Yasuo Ina; Yoshifumi Fukunishi; Yumiko Mizukoshi; Haruki Nakamura; Ichio Shimada
Journal:  J Biomol NMR       Date:  2006-03       Impact factor: 2.582

Review 8.  Ultrafast 2D NMR: an emerging tool in analytical spectroscopy.

Authors:  Patrick Giraudeau; Lucio Frydman
Journal:  Annu Rev Anal Chem (Palo Alto Calif)       Date:  2014       Impact factor: 10.745

9.  Cost-Effectiveness of Three Rounds of Mammography Breast Cancer Screening in Iranian Women.

Authors:  Shahpar Haghighat; Mohammad Esmaeil Akbari; Parvin Yavari; Mehdi Javanbakht; Shahram Ghaffari
Journal:  Iran J Cancer Prev       Date:  2016-02-23
  9 in total

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