Literature DB >> 7583653

Structure-based design of a lysozyme with altered catalytic activity.

R Kuroki1, L H Weaver, B W Matthews.   

Abstract

Here we show that the substitution Thr 26-->His in the active site of T4 lysozyme causes the product to change from the alpha- to the beta-anomer. This implies an alteration in the catalytic mechanism of the enzyme. From the change in product, together with inspection of relevant crystal structures, it is inferred that wild-type T4 lysozyme is an anomer-inverting enzyme with a single displacement mechanism in which water attacks from the alpha-side of the substrate. In contrast, the mutant T26H is an anomer-retaining enzyme with an apparently double displacement mechanism in which a water molecule attacks from the opposite side of the substrate. The results also show that the mechanism of wild-type T4 lysozyme differs from that of hen egg-white lysozyme even though both enzymes are presumed to have evolved from a common precursor.

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Year:  1995        PMID: 7583653     DOI: 10.1038/nsb1195-1007

Source DB:  PubMed          Journal:  Nat Struct Biol        ISSN: 1072-8368


  18 in total

1.  Identification, structure, and function of a novel type VI secretion peptidoglycan glycoside hydrolase effector-immunity pair.

Authors:  John C Whitney; Seemay Chou; Alistair B Russell; Jacob Biboy; Taylor E Gardiner; Michael A Ferrin; Mitchell Brittnacher; Waldemar Vollmer; Joseph D Mougous
Journal:  J Biol Chem       Date:  2013-07-22       Impact factor: 5.157

2.  The pKa values of the catalytic residues in the retaining glycoside hydrolase T26H mutant of T4 lysozyme.

Authors:  Jacob A Brockerman; Mark Okon; Stephen G Withers; Lawrence P McIntosh
Journal:  Protein Sci       Date:  2019-01-12       Impact factor: 6.725

3.  Alteration of T4 lysozyme structure by second-site reversion of deleterious mutations.

Authors:  A R Poteete; D Rennell; S E Bouvier; L W Hardy
Journal:  Protein Sci       Date:  1997-11       Impact factor: 6.725

4.  A point mutation leads to altered product specificity in beta-lactamase catalysis.

Authors:  E R Lewis; K M Winterberg; A L Fink
Journal:  Proc Natl Acad Sci U S A       Date:  1997-01-21       Impact factor: 11.205

5.  Mechanistic consequences of replacing the active-site nucleophile Glu-358 in Agrobacterium sp. beta-glucosidase with a cysteine residue.

Authors:  S L Lawson; R A Warren; S G Withers
Journal:  Biochem J       Date:  1998-02-15       Impact factor: 3.857

6.  Heterologous expression and characterization of wild-type and mutant forms of a 26 kDa endochitinase from barley (Hordeum vulgare L.).

Authors:  M D Andersen; A Jensen; J D Robertus; R Leah; K Skriver
Journal:  Biochem J       Date:  1997-03-15       Impact factor: 3.857

7.  Structural basis of the conversion of T4 lysozyme into a transglycosidase by reengineering the active site.

Authors:  R Kuroki; L H Weaver; B W Matthews
Journal:  Proc Natl Acad Sci U S A       Date:  1999-08-03       Impact factor: 11.205

8.  Substrate recognition mechanism of a glycosyltrehalose trehalohydrolase from Sulfolobus solfataricus KM1.

Authors:  Nobuo Okazaki; Taro Tamada; Michael D Feese; Masaru Kato; Yutaka Miura; Toshihiro Komeda; Kazuo Kobayashi; Keiji Kondo; Michael Blaber; Ryota Kuroki
Journal:  Protein Sci       Date:  2012-02-28       Impact factor: 6.725

9.  Dissecting single-molecule signal transduction in carbon nanotube circuits with protein engineering.

Authors:  Yongki Choi; Tivoli J Olsen; Patrick C Sims; Issa S Moody; Brad L Corso; Mytrang N Dang; Gregory A Weiss; Philip G Collins
Journal:  Nano Lett       Date:  2013-01-24       Impact factor: 11.189

10.  Backbone 1H, 13C, and 15N resonance assignments for lysozyme from bacteriophage lambda.

Authors:  Alexandre Di Paolo; Valérie Duval; André Matagne; Christina Redfield
Journal:  Biomol NMR Assign       Date:  2010-03-20       Impact factor: 0.746

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