Literature DB >> 7524020

The signal recognition particle database (SRPDB).

C Zwieb1, N Larsen.   

Abstract

The SRPDB (signal recognition particle database) provides aligned SRP RNA and protein sequences, annotated and phylogenetically ordered. This release includes 82 SRP RNAs (including 22 bacterial and 9 archaeal homologs) and a total of 20 protein sequences representing SRP9, SRP14, SRP19, SRP54, SRP68, and SRP72. The offerings also include representative RNA secondary structure diagrams.

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Year:  1994        PMID： 7524020      PMCID： PMC308307          DOI： 10.1093/nar/22.17.3483

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN： 0305-1048            Impact factor:   16.971


  9 in total

1.  Basic local alignment search tool.

Authors:  S F Altschul; W Gish; W Miller; E W Myers; D J Lipman
Journal:  J Mol Biol       Date:  1990-10-05       Impact factor: 5.469

2.  The EMBL Data Library.

Authors:  D G Higgins; R Fuchs; P J Stoehr; G N Cameron
Journal:  Nucleic Acids Res       Date:  1992-05-11       Impact factor: 16.971

3.  SRP-RNA sequence alignment and secondary structure.

Authors:  N Larsen; C Zwieb
Journal:  Nucleic Acids Res       Date:  1991-01-25       Impact factor: 16.971

4.  The signal recognition particle database (SRPDB).

Authors:  N Larsen; C Zwieb
Journal:  Nucleic Acids Res       Date:  1993-07-01       Impact factor: 16.971

5.  ALMA, an editor for large sequence alignments.

Authors:  S Thirup; N E Larsen
Journal:  Proteins       Date:  1990

6.  The ribosomal database project.

Authors:  N Larsen; G J Olsen; B L Maidak; M J McCaughey; R Overbeek; T J Macke; T L Marsh; C R Woese
Journal:  Nucleic Acids Res       Date:  1993-07-01       Impact factor: 16.971

7.  The SWISS-PROT protein sequence data bank, recent developments.

Authors:  A Bairoch; B Boeckmann
Journal:  Nucleic Acids Res       Date:  1993-07-01       Impact factor: 16.971

8.  A comprehensive set of sequence analysis programs for the VAX.

Authors:  J Devereux; P Haeberli; O Smithies
Journal:  Nucleic Acids Res       Date:  1984-01-11       Impact factor: 16.971

9.  Evolutionary relationships amongst archaebacteria. A comparative study of 23 S ribosomal RNAs of a sulphur-dependent extreme thermophile, an extreme halophile and a thermophilic methanogen.

Authors:  H Leffers; J Kjems; L Ostergaard; N Larsen; R A Garrett
Journal:  J Mol Biol       Date:  1987-05-05       Impact factor: 5.469
  9 in total
  4 in total

1.  Interaction of rice and human SRP19 polypeptides with signal recognition particle RNA.

Authors:  K Chittenden; K Gowda; S D Black; C Zwieb
Journal:  Plant Mol Biol       Date:  1997-06       Impact factor: 4.076

Review 2.  Structure and functional properties of prokaryotic small noncoding RNAs.

Authors:  K Mikulík
Journal:  Folia Microbiol (Praha)       Date:  2003       Impact factor: 2.099

3.  Structure of 4.5S RNA in the signal recognition particle of Escherichia coli as studied by enzymatic and chemical probing.

Authors:  G Lentzen; H Moine; C Ehresmann; B Ehresmann; W Wintermeyer
Journal:  RNA       Date:  1996-03       Impact factor: 4.942

4.  The Signal Recognition Particle Database (SRPDB).

Authors:  N Larsen; C Zwieb
Journal:  Nucleic Acids Res       Date:  1996-01-01       Impact factor: 16.971
  4 in total

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