Literature DB >> 7024920

Determination of base pairing in yeast 5S and 5.8S RNA infrared spectroscopy.

J Stulz, T Ackermann, B Appel, V A Erdmann.   

Abstract

Infrared Spectroscopy was used to determine the numbers of base pairs for yeast 5S RNA and 5.8S RNA. The spectra were recorded at 20 degrees C and 50 degrees C, where tertiary interactions are assumed to be of less importance. It may be concluded that the structure of both RNAs is highly ordered and that there are large contributions of tertiary interactions. The results are compared with data derived from structural models that were proposed in the literature as well as with data previously published for prokaryotic 5S RNAs.

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Year:  1981        PMID： 7024920      PMCID： PMC327396          DOI： 10.1093/nar/9.15.3851

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN： 0305-1048            Impact factor:   16.971


  23 in total

1.  Structure of yeast phenylalanine transfer RNA at 2.5 A resolution.

Authors:  J E Ladner; A Jack; J D Robertus; R S Brown; D Rhodes; B F Clark; A Klug
Journal:  Proc Natl Acad Sci U S A       Date:  1975-11       Impact factor: 11.205

2.  Nucleotide sequence of 5 S RNA from Torulopsis utilis.

Authors:  K Nishikawa; S Takemura
Journal:  FEBS Lett       Date:  1974-03-15       Impact factor: 4.124

3.  The extent of base pairing in 5 s RNA. Yeast 5 s RNA.

Authors:  Y P Wong; D R Kearns; B R Reid; R G Shulman
Journal:  J Mol Biol       Date:  1972-12-30       Impact factor: 5.469

4.  The nucleotide sequence of Saccharomyces cerevisiae 5.8 S ribosomal ribonucleic acid.

Authors:  G M Rubin
Journal:  J Biol Chem       Date:  1973-06-10       Impact factor: 5.157

5.  Optical properties and base pairing of E. coli 5S RNA.

Authors:  E G Richards; M E Geroch; H Simpkins; R Lecanidou
Journal:  Biopolymers       Date:  1972       Impact factor: 2.505

6.  Oligonucleotide binding to the native and denatured conformers of yeast transfer RNA-3 Lea.

Authors:  O C Uhlenbeck; J G Chirikjian; J R Fresco
Journal:  J Mol Biol       Date:  1974-11-05       Impact factor: 5.469

7.  Amount of adenine and uracil base pairs in E. coli 23S, 16S and 5S ribosomal RNA.

Authors:  F Cramer; V A Erdmann
Journal:  Nature       Date:  1968-04-06       Impact factor: 49.962

8.  Determination of the base pairing content of ribonucleic acids by infrared spectroscopy.

Authors:  G J Thomas
Journal:  Biopolymers       Date:  1969       Impact factor: 2.505

9.  Polynucleotides. VI. Interaction between polyguanylic acid and polycytidylic acid.

Authors:  F Pochon; A M Michelson
Journal:  Proc Natl Acad Sci U S A       Date:  1965-06       Impact factor: 11.205

10.  Hydrogen bonding in yeast phenylalanine transfer RNA.

Authors:  G J Quigley; A H Wang; N C Seeman; F L Suddath; A Rich; J L Sussman; S H Kim
Journal:  Proc Natl Acad Sci U S A       Date:  1975-12       Impact factor: 11.205
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  4 in total

1.  RNA structure analysis using T2 ribonuclease: detection of pH and metal ion induced conformational changes in yeast tRNAPhe.

Authors:  C P Vary; J N Vournakis
Journal:  Nucleic Acids Res       Date:  1984-09-11       Impact factor: 16.971

2.  Melting of local ordered structures in yeast 5S ribosomal RNA in aqueous salts.

Authors:  S Ohta; S Maruyama; K Nitta; S Sugai
Journal:  Nucleic Acids Res       Date:  1983-05-25       Impact factor: 16.971

3.  Three-dimensional structural model of eubacterial 5S RNA that has functional implications.

Authors:  T Pieler; V A Erdmann
Journal:  Proc Natl Acad Sci U S A       Date:  1982-08       Impact factor: 11.205

4.  The 5S RNA genes of Schizosaccharomyces pombe.

Authors:  J Mao; B Appel; J Schaack; S Sharp; H Yamada; D Söll
Journal:  Nucleic Acids Res       Date:  1982-01-22       Impact factor: 16.971
  4 in total

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