Literature DB >> 1105583

Structure of yeast phenylalanine transfer RNA at 2.5 A resolution.

J E Ladner, A Jack, J D Robertus, R S Brown, D Rhodes, B F Clark, A Klug.   

Abstract

The x-ray analysis of the monoclinic form of yeast tRNAPhe has been taken to a resolution of 2.5 A by the method of isomorphous replacement. The model proposed at 3 A has been confirmed and extended to reveal additional features of the tertiary structure and of the stereochemistry. An extensive hydrogen bonding network is described involving specific interactions between bases and the ribose-phosphate backbone. The structure of a G-U base pair has been solved.

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Year:  1975        PMID： 1105583      PMCID： PMC388732          DOI： 10.1073/pnas.72.11.4414

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN： 0027-8424            Impact factor:   11.205


  15 in total

1.  Structure of yeast phenylalanine tRNA at 3 A resolution.

Authors:  J D Robertus; J E Ladner; J T Finch; D Rhodes; R S Brown; B F Clark; A Klug
Journal:  Nature       Date:  1974-08-16       Impact factor: 49.962

2.  Three-dimensional tertiary structure of yeast phenylalanine transfer RNA.

Authors:  S H Kim; F L Suddath; G J Quigley; A McPherson; J L Sussman; A H Wang; N C Seeman; A Rich
Journal:  Science       Date:  1974-08-02       Impact factor: 47.728

3.  The involvement of 5S RNA in the binding of tRNA to ribosomes.

Authors:  V A Erdmann; M Sprinzl; O Pongs
Journal:  Biochem Biophys Res Commun       Date:  1973-10-01       Impact factor: 3.575

4.  The general structure of transfer RNA molecules.

Authors:  S H Kim; J L Sussman; F L Suddath; G J Quigley; A McPherson; A H Wang; N C Seeman; A RICH
Journal:  Proc Natl Acad Sci U S A       Date:  1974-12       Impact factor: 11.205

5.  The structural geometry of co-ordinated base changes in transfer RNA.

Authors:  A Klug; J Ladner; J D Robertus
Journal:  J Mol Biol       Date:  1974-11-05       Impact factor: 5.469

6.  Energy refinement of hen egg-white lysozyme.

Authors:  M Levitt
Journal:  J Mol Biol       Date:  1974-01-25       Impact factor: 5.469

7.  Tryptophan transfer RNA as the UGA suppressor.

Authors:  D Hirsh
Journal:  J Mol Biol       Date:  1971-06-14       Impact factor: 5.469

Review 8.  The geometry of nucleic acids.

Authors:  S Arnott
Journal:  Prog Biophys Mol Biol       Date:  1970       Impact factor: 3.667

9.  Studies on polynucleotides. LXXXII. Yeast phenylalanine transfer ribonucleic acid: partial digestion with ribonuclease T-1 and derivation of the total primary structure.

Authors:  U L RajBhandary; S H Chang
Journal:  J Biol Chem       Date:  1968-02-10       Impact factor: 5.157

10.  Atomic co-ordinates for yeast phenylalanine tRNA.

Authors:  J E Ladner; A Jack; J D Robertus; R S Brown; D Rhodes; B F Clark; A Klug
Journal:  Nucleic Acids Res       Date:  1975-09       Impact factor: 16.971
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  95 in total

1.  Domain-domain communication in a miniature archaebacterial tRNA synthetase.

Authors:  B A Steer; P Schimmel
Journal:  Proc Natl Acad Sci U S A       Date:  1999-11-23       Impact factor: 11.205

Review 2.  The G x U wobble base pair. A fundamental building block of RNA structure crucial to RNA function in diverse biological systems.

Authors:  G Varani; W H McClain
Journal:  EMBO Rep       Date:  2000-07       Impact factor: 8.807

3.  Intramolecular secondary structure rearrangement by the kissing interaction of the Neurospora VS ribozyme.

Authors:  A A Andersen; R A Collins
Journal:  Proc Natl Acad Sci U S A       Date:  2001-06-26       Impact factor: 11.205

Review 4.  Translation: in retrospect and prospect.

Authors:  C R Woese
Journal:  RNA       Date:  2001-08       Impact factor: 4.942

5.  Trbp111 selectively binds a noncovalently assembled tRNA-like structure.

Authors:  Tetsuo Kushiro; Paul Schimmel
Journal:  Proc Natl Acad Sci U S A       Date:  2002-12-12       Impact factor: 11.205

6.  Essential regions of the tRNA primer required for HIV-1 infectivity.

Authors:  Q Yu; C D Morrow
Journal:  Nucleic Acids Res       Date:  2000-12-01       Impact factor: 16.971

7.  Tertiary structure base pairs between D- and TpsiC-loops of Escherichia coli tRNA(Leu) play important roles in both aminoacylation and editing.

Authors:  Xing Du; En-Duo Wang
Journal:  Nucleic Acids Res       Date:  2003-06-01       Impact factor: 16.971

8.  Representation, searching and discovery of patterns of bases in complex RNA structures.

Authors:  Anne-Marie Harrison; Darren R South; Peter Willett; Peter J Artymiuk
Journal:  J Comput Aided Mol Des       Date:  2003-08       Impact factor: 3.686

9.  A mammalian mitochondrial serine transfer RNA lacking the "dihydrouridine" loop and stem.

Authors:  M H de Bruijn; P H Schreier; I C Eperon; B G Barrell; E Y Chen; P W Armstrong; J F Wong; B A Roe
Journal:  Nucleic Acids Res       Date:  1980-11-25       Impact factor: 16.971

10.  The nucleotide sequence of a small (3S) seryl-tRNA (anticodon GCU) from beef heart mitochondria.

Authors:  P Arcari; G G Brownlee
Journal:  Nucleic Acids Res       Date:  1980-11-25       Impact factor: 16.971
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