Literature DB >> 6278416

The 5S RNA genes of Schizosaccharomyces pombe.

J Mao, B Appel, J Schaack, S Sharp, H Yamada, D Söll.   

Abstract

The genomic arrangement and sequences of S. pombe 5S RNA genes are reported here. The 5S gene sequences appear to be dispersed within the genome, and are found independently of other rRNA genes. The sequences of two 5S genes examined show identical coding regions of 119 base pairs but have widely varying flanking sequences. A tRNAAsp gene is found in the 3' flanking region of one of the 5S genes. The tRNAAsp gene is faithfully transcribed in an X. laevis in vitro system, while the 5S genes are not transcribed in this system. The phylogenetic position of S. pombe is examined through comparison of 5S RNA sequences.

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Year:  1982        PMID: 6278416      PMCID: PMC326152          DOI: 10.1093/nar/10.2.487

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  33 in total

1.  Isolation of yeast DNA.

Authors:  D R Cryer; R Eccleshall; J Marmur
Journal:  Methods Cell Biol       Date:  1975       Impact factor: 1.441

Review 2.  Preparation of RNA and ribosomes from yeast.

Authors:  G M Rubin
Journal:  Methods Cell Biol       Date:  1975       Impact factor: 1.441

3.  Chain length determination of small double- and single-stranded DNA molecules by polyacrylamide gel electrophoresis.

Authors:  T Maniatis; A Jeffrey; H van deSande
Journal:  Biochemistry       Date:  1975-08-26       Impact factor: 3.162

4.  Detection of specific sequences among DNA fragments separated by gel electrophoresis.

Authors:  E M Southern
Journal:  J Mol Biol       Date:  1975-11-05       Impact factor: 5.469

5.  The primary structure of aspartate transfer ribonucleic acid from brewer's yeast. II. Partial digestions with pancreatic ribonuclease and T 1 ribonuclease and derivation of complete sequence.

Authors:  J Gangloff; G Keith; J P Ebel; G Dirheimer
Journal:  Biochim Biophys Acta       Date:  1972-01-31

6.  Detection of two restriction endonuclease activities in Haemophilus parainfluenzae using analytical agarose--ethidium bromide electrophoresis.

Authors:  P A Sharp; B Sugden; J Sambrook
Journal:  Biochemistry       Date:  1973-07-31       Impact factor: 3.162

7.  Nature of Col E 1 plasmid replication in Escherichia coli in the presence of the chloramphenicol.

Authors:  D B Clewell
Journal:  J Bacteriol       Date:  1972-05       Impact factor: 3.490

8.  Gene-enzyme relationships in the tryptophan pathway of Schizosaccharomyces pombe.

Authors:  M E Schweingruber; R Dietrich
Journal:  Experientia       Date:  1973-09-15

9.  5S RNA secondary structure.

Authors:  G E Fox; C R Woese
Journal:  Nature       Date:  1975-08-07       Impact factor: 49.962

10.  A system for mapping DNA sequences in the chromosomes of Drosophila melanogaster.

Authors:  P C Wensink; D J Finnegan; J E Donelson; D S Hogness
Journal:  Cell       Date:  1974-12       Impact factor: 41.582

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  32 in total

Review 1.  Comparison of the RNA polymerase III transcription machinery in Schizosaccharomyces pombe, Saccharomyces cerevisiae and human.

Authors:  Y Huang; R J Maraia
Journal:  Nucleic Acids Res       Date:  2001-07-01       Impact factor: 16.971

2.  Characterization of human 5S rRNA genes.

Authors:  P D Sørensen; S Frederiksen
Journal:  Nucleic Acids Res       Date:  1991-08-11       Impact factor: 16.971

3.  Unusual organization and lack of recombination in the ribosomal RNA genes of Coprinus cinereus.

Authors:  J Rhodes Cassidy; D Moore; B C Lu; P J Pukkila
Journal:  Curr Genet       Date:  1984-10       Impact factor: 3.886

4.  A functional dominant mutation in Schizosaccharomyces pombe RNase MRP RNA affects nuclear RNA processing and requires the mitochondrial-associated nuclear mutation ptp1-1 for viability.

Authors:  J L Paluh; D A Clayton
Journal:  EMBO J       Date:  1996-09-02       Impact factor: 11.598

5.  On the evolution of ribosomal RNA.

Authors:  C G Clark
Journal:  J Mol Evol       Date:  1987       Impact factor: 2.395

6.  Molecular cloning and analysis of Schizosaccharomyces pombe rad9, a gene involved in DNA repair and mutagenesis.

Authors:  H B Lieberman; K M Hopkins; M Laverty; H M Chu
Journal:  Mol Gen Genet       Date:  1992-04

7.  Aspergillus nidulans 5S rRNA genes and pseudogenes.

Authors:  E Bartnik; S Bartoszewski; P Borsuk; J Empel
Journal:  Curr Genet       Date:  1986       Impact factor: 3.886

8.  A minor class of 5S rRNA genes in Saccharomyces cerevisiae X2180-1B, one member of which lies adjacent to a Ty transposable element.

Authors:  P W Piper; A Lockheart; N Patel
Journal:  Nucleic Acids Res       Date:  1984-05-25       Impact factor: 16.971

9.  Organization of ribosomal RNA genes in the fungus Cochliobolus heterostrophus.

Authors:  R C Garber; B G Turgeon; E U Selker; O C Yoder
Journal:  Curr Genet       Date:  1988-12       Impact factor: 3.886

10.  Chromosomal mapping of tRNA genes from Dictyostelium discoideum.

Authors:  T Dingermann; E Amon; K L Williams; D L Welker
Journal:  Mol Gen Genet       Date:  1987-04
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