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Literature DB >> 6546426

Computer analysis and structure prediction of nucleic acids and proteins.

Abstract

We have developed an integrated computer system for analysis of nucleic acid and protein sequences, which consists of sequence and structure databases, a relational database, and software for structural analysis. The system is potentially applicable to a number of problems in structural biology including predictive classification of the function and location of oncogene products.

Mesh：

Substances：
Nucleic Acids
Proteins

Year: 1984 PMID： 6546426 PMCID： PMC321015 DOI： 10.1093/nar/12.1part1.417

Source DB: PubMed Journal: Nucleic Acids Res ISSN： 0305-1048 Impact factor: 16.971

6 in total

1. The Protein Data Bank: a computer-based archival file for macromolecular structures.

Authors: F C Bernstein; T F Koetzle; G J Williams; E F Meyer; M D Brice; J R Rodgers; O Kennard; T Shimanouchi; M Tasumi
Journal: J Mol Biol Date: 1977-05-25 Impact factor: 5.469

2. Pattern recognition in nucleic acid sequences. II. An efficient method for finding locally stable secondary structures.

Authors: M I Kanehisa; W B Goad
Journal: Nucleic Acids Res Date: 1982-01-11 Impact factor: 16.971

3. Los Alamos sequence analysis package for nucleic acids and proteins.

Authors: M I Kanehisa
Journal: Nucleic Acids Res Date: 1982-01-11 Impact factor: 16.971

4. Pattern recognition in nucleic acid sequences. I. A general method for finding local homologies and symmetries.

Authors: W B Goad; M I Kanehisa
Journal: Nucleic Acids Res Date: 1982-01-11 Impact factor: 16.971

5. Identification of common molecular subsequences.

Authors: T F Smith; M S Waterman
Journal: J Mol Biol Date: 1981-03-25 Impact factor: 5.469

6. Rapid similarity searches of nucleic acid and protein data banks.

Authors: W J Wilbur; D J Lipman
Journal: Proc Natl Acad Sci U S A Date: 1983-02 Impact factor: 11.205

6 in total

14 in total

1. cDNA cloning of an mRNA encoding a sulfur-rich 10 kDa prolamin polypeptide in rice seeds.

Authors: T Masumura; D Shibata; T Hibino; T Kato; K Kawabe; G Takeba; K Tanaka; S Fujii
Journal: Plant Mol Biol Date: 1989-02 Impact factor: 4.076

Review 2. A relational database of transcription factors.

Authors: D Ghosh
Journal: Nucleic Acids Res Date: 1990-04-11 Impact factor: 16.971

3. Activation of human c-raf-1 by replacing the N-terminal region with different sequences.

Authors: T Tahira; M Ochiai; K Hayashi; M Nagao; T Sugimura
Journal: Nucleic Acids Res Date: 1987-06-25 Impact factor: 16.971

4. MBIS--an integrated system for the retrieval and analyses of sequence data from nucleic acids and proteins.

Authors: C A Bucholtz; A H Reisner
Journal: Nucleic Acids Res Date: 1986-01-10 Impact factor: 16.971

5. DNA damage-inducible transcripts in mammalian cells.

Authors: A J Fornace; I Alamo; M C Hollander
Journal: Proc Natl Acad Sci U S A Date: 1988-12 Impact factor: 11.205

6. An analysis of the organization and evolution of type 4 fimbrial (MePhe) subunit proteins.

Authors: B Dalrymple; J S Mattick
Journal: J Mol Evol Date: 1987 Impact factor: 2.395

7. Evi-2, a common integration site involved in murine myeloid leukemogenesis.

Authors: A M Buchberg; H G Bedigian; N A Jenkins; N G Copeland
Journal: Mol Cell Biol Date: 1990-09 Impact factor: 4.272

8. Characterization of rat c-myc and adjacent regions.

Authors: K Hayashi; R Makino; H Kawamura; A Arisawa; K Yoneda
Journal: Nucleic Acids Res Date: 1987-08-25 Impact factor: 16.971

9. Rat c-raf oncogene activation by a rearrangement that produces a fused protein.

Authors: F Ishikawa; F Takaku; M Nagao; T Sugimura
Journal: Mol Cell Biol Date: 1987-03 Impact factor: 4.272

10. Human uroporphyrinogen III synthase: molecular cloning, nucleotide sequence, and expression of a full-length cDNA.

Authors: S F Tsai; D F Bishop; R J Desnick
Journal: Proc Natl Acad Sci U S A Date: 1988-10 Impact factor: 11.205