Literature DB >> 6334274

Cyclic diacyl groups for protection of the N6-amino group of deoxyadenosine in oligodeoxynucleotide synthesis.

A Kume, R Iwase, M Sekine, T Hata.   

Abstract

Three kinds of substituted phthaloyl groups and a succinyl group were introduced onto the N6-amino function of deoxyadenosine derivatives. Among them, the succinyl group was found to be the most effective for prevention of depurination upon detritylation in acidic media and the most stable in basic media. Protection of the N6-amino function of 5'-O-dimethoxytrityldeoxyadenosine and introduction of a succinate linker into the 3'-hydroxyl were achieved simultaneously by a one-step reaction with succinic anhydride. A tetradeoxyribonucleotide, dTpTpTpA containing a 3'-terminal deoxyadenosine was successfully synthesized on a polystyrene support via the phosphotriester method.

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Year:  1984        PMID: 6334274      PMCID: PMC320396          DOI: 10.1093/nar/12.22.8525

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  7 in total

1.  Solvolysis of adenine nucleosides. I. Effects of sugars and adenine substituents on acid solvolyses.

Authors:  E R Garrett; P J Mehta
Journal:  J Am Chem Soc       Date:  1972-11-29       Impact factor: 15.419

2.  Syringe method for stepwise chemical synthesis of oligonucleotides.

Authors:  T Tanaka; R L Letsinger
Journal:  Nucleic Acids Res       Date:  1982-05-25       Impact factor: 16.971

3.  Nature of side-reactions in oligonucleotide synthesis involving arenesulphonyl derivatives of 3-nitro-1,2,4-triazole and related condensing agents.

Authors:  C B Reese; A Ubasawa
Journal:  Nucleic Acids Symp Ser       Date:  1980

4.  Arylsulfonyltetrazoles, new coupling reagents and further improvements in the triester method for the synthesis of deoxyribooligonucleotides.

Authors:  J Stawinski; T Hozumi; S A Narang; C P Bahl; R Wu
Journal:  Nucleic Acids Res       Date:  1977-02       Impact factor: 16.971

5.  Dialkylformamidines: depurination resistant N6-protecting group for deoxyadenosine.

Authors:  B C Froehler; M D Matteucci
Journal:  Nucleic Acids Res       Date:  1983-11-25       Impact factor: 16.971

6.  Solid-phase synthesis of polynucleotides. III. Synthesis of polynucleotides with defined sequences by the block coupling phosphotriester method.

Authors:  K Miyoshi; T Huang; K Itakura
Journal:  Nucleic Acids Res       Date:  1980-11-25       Impact factor: 16.971

7.  Studies on polynucleotides. 53. Syntheses of trinucleotides containing adenylate and 2'-deoxyadenylate units and a study of their effect on the binding of lysyl soluble ribonucleic acid to ribosomes.

Authors:  M W Moon; S Nishimura; H G Khorana
Journal:  Biochemistry       Date:  1966-03       Impact factor: 3.162

  7 in total
  5 in total

1.  Highly efficient synthesis of oligodeoxyribonucleotides using alpha-phenyl cinnamoyl group for selective amino protection.

Authors:  A K Nagaich; K Misra
Journal:  Nucleic Acids Res       Date:  1989-07-11       Impact factor: 16.971

2.  Kinetic studies on depurination and detritylation of CPG-bound intermediates during oligonucleotide synthesis.

Authors:  M Septak
Journal:  Nucleic Acids Res       Date:  1996-08-01       Impact factor: 16.971

3.  The final deprotection step in oligonucleotide synthesis is reduced to a mild and rapid ammonia treatment by using labile base-protecting groups.

Authors:  J C Schulhof; D Molko; R Teoule
Journal:  Nucleic Acids Res       Date:  1987-01-26       Impact factor: 16.971

4.  Preparation of covalently linked DNA-RNA hybrids and arabinocytidine containing DNA fragments.

Authors:  E de Vroom; H C Roelen; C P Saris; T N Budding; G A van der Marel; J H van Boom
Journal:  Nucleic Acids Res       Date:  1988-04-11       Impact factor: 16.971

5.  Synthesis of oligodeoxynucleotides using fully protected deoxynucleoside 3'-phosphoramidite building blocks and base recognition of oligodeoxynucleotides incorporating N3-cyano-ethylthymine.

Authors:  Hirosuke Tsunoda; Tomomi Kudo; Akihiro Ohkubo; Kohji Seio; Mitsuo Sekine
Journal:  Molecules       Date:  2010-10-27       Impact factor: 4.411

  5 in total

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