Literature DB >> 6278414

Computer programs for nucleic acid sequence manipulation.

R M Blumenthal, P J Rice, R J Roberts.   

Abstract

Computer programs are described which help during the collection and analysis of nucleic acid sequence data. They are written in FORTRAN and have been implemented on a PDP 11/60 computer.

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Year:  1982        PMID: 6278414      PMCID: PMC326117          DOI: 10.1093/nar/10.1.91

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  6 in total

1.  A new method for sequencing DNA.

Authors:  A M Maxam; W Gilbert
Journal:  Proc Natl Acad Sci U S A       Date:  1977-02       Impact factor: 11.205

2.  Cloning in single-stranded bacteriophage as an aid to rapid DNA sequencing.

Authors:  F Sanger; A R Coulson; B G Barrell; A J Smith; B A Roe
Journal:  J Mol Biol       Date:  1980-10-25       Impact factor: 5.469

3.  Steps toward computer analysis of nucleotide sequences.

Authors:  T R Gingeras; R J Roberts
Journal:  Science       Date:  1980-09-19       Impact factor: 47.728

4.  A system for shotgun DNA sequencing.

Authors:  J Messing; R Crea; P H Seeburg
Journal:  Nucleic Acids Res       Date:  1981-01-24       Impact factor: 16.971

5.  DNA sequencing with chain-terminating inhibitors.

Authors:  F Sanger; S Nicklen; A R Coulson
Journal:  Proc Natl Acad Sci U S A       Date:  1977-12       Impact factor: 11.205

6.  Spliced segments at the 5' terminus of adenovirus 2 late mRNA.

Authors:  S M Berget; C Moore; P A Sharp
Journal:  Proc Natl Acad Sci U S A       Date:  1977-08       Impact factor: 11.205

  6 in total
  12 in total

1.  Sequence, internal homology and high-level expression of the gene for a DNA-(cytosine N4)-methyltransferase, M.Pvu II.

Authors:  T Tao; J Walter; K J Brennan; M M Cotterman; R M Blumenthal
Journal:  Nucleic Acids Res       Date:  1989-06-12       Impact factor: 16.971

2.  Cloning and characterization of the HpaII methylase gene.

Authors:  C O Card; G G Wilson; K Weule; J Hasapes; A Kiss; R J Roberts
Journal:  Nucleic Acids Res       Date:  1990-03-25       Impact factor: 16.971

3.  DNA sequence of the herpes simplex virus type 1 gene whose product is responsible for transcriptional activation of immediate early promoters.

Authors:  M A Dalrymple; D J McGeoch; A J Davison; C M Preston
Journal:  Nucleic Acids Res       Date:  1985-11-11       Impact factor: 16.971

4.  A peptide to DNA conversion program.

Authors:  J A van den Berg; M Osinga
Journal:  Nucleic Acids Res       Date:  1986-01-10       Impact factor: 16.971

5.  Cloning and characterization of the genes encoding the MspI restriction modification system.

Authors:  P M Lin; C H Lee; R J Roberts
Journal:  Nucleic Acids Res       Date:  1989-04-25       Impact factor: 16.971

6.  Microcomputer programs for back translation of protein to DNA sequences and analysis of ambiguous DNA sequences.

Authors:  D W Mount; B Conrad
Journal:  Nucleic Acids Res       Date:  1984-01-11       Impact factor: 16.971

7.  Computer programs for handling nucleic acid sequences.

Authors:  C Keller; M Corcoran; R J Roberts
Journal:  Nucleic Acids Res       Date:  1984-01-11       Impact factor: 16.971

8.  The nucleotide sequence of the chicken thymidine kinase gene and the relationship of its predicted polypeptide to that of the vaccinia virus thymidine kinase.

Authors:  T J Kwoh; J A Engler
Journal:  Nucleic Acids Res       Date:  1984-05-11       Impact factor: 16.971

9.  The nucleotide sequence of the trimethoprim-resistant dihydrofolate reductase gene harbored by Tn7.

Authors:  M E Fling; C Richards
Journal:  Nucleic Acids Res       Date:  1983-08-11       Impact factor: 16.971

10.  The sequence of the tms transcript 2 locus of the A. tumefaciens plasmid pTiA6 and characterization of the mutation in pTiA66 that is responsible for auxin attenuation.

Authors:  D Sciaky; M F Thomashow
Journal:  Nucleic Acids Res       Date:  1984-02-10       Impact factor: 16.971

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