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Literature DB >> 6278411

Interactive computer programs in sequence data analysis.

Abstract

We present interactive computer programs for the analysis of nucleic acid sequences. In order to handle these programs, minimum computer experience is sufficient. The nucleotide sequence of the human gamma globin gene complex is used as an example to illustrate the data analysis.

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Year: 1982 PMID： 6278411 PMCID： PMC326144 DOI： 10.1093/nar/10.1.433

Source DB: PubMed Journal: Nucleic Acids Res ISSN： 0305-1048 Impact factor: 16.971

10 in total

1. Computer analysis of nucleic acid regulatory sequences.

Authors: L J Korn; C L Queen; M N Wegman
Journal: Proc Natl Acad Sci U S A Date: 1977-10 Impact factor: 11.205

2. Estimation of secondary structure in ribonucleic acids.

Authors: I Tinoco; O C Uhlenbeck; M D Levine
Journal: Nature Date: 1971-04-09 Impact factor: 49.962

3. Computer analysis of nucleic acids and proteins.

Authors: C L Queen; L J Korn
Journal: Methods Enzymol Date: 1980 Impact factor: 1.600

4. A conversational system for the computer analysis of nucleic acid sequences.

Authors: R Sege; D Söll; F H Ruddle; C Queen
Journal: Nucleic Acids Res Date: 1981-01-24 Impact factor: 16.971

5. Steps toward computer analysis of nucleotide sequences.

Authors: T R Gingeras; R J Roberts
Journal: Science Date: 1980-09-19 Impact factor: 47.728

6. Further procedures for sequence analysis by computer.

Authors: R Staden
Journal: Nucleic Acids Res Date: 1978-03 Impact factor: 16.971

7. The pitch of chromatin DNA is reflected in its nucleotide sequence.

Authors: E N Trifonov; J L Sussman
Journal: Proc Natl Acad Sci U S A Date: 1980-07 Impact factor: 11.205

8. A computer program to search for tRNA genes.

Authors: R Staden
Journal: Nucleic Acids Res Date: 1980-02-25 Impact factor: 16.971

9. Sequence data handling by computer.

Authors: R Staden
Journal: Nucleic Acids Res Date: 1977-11 Impact factor: 16.971

10. Human fetal G gamma- and A gamma-globin genes: complete nucleotide sequences suggest that DNA can be exchanged between these duplicated genes.

Authors: J L Slightom; A E Blechl; O Smithies
Journal: Cell Date: 1980-10 Impact factor: 41.582

10 in total

5 in total

Interactive computer programs in sequence data analysis.

1. Computer analysis of nucleic acid regulatory sequences.

2. Estimation of secondary structure in ribonucleic acids.

3. Computer analysis of nucleic acids and proteins.

4. A conversational system for the computer analysis of nucleic acid sequences.

5. Steps toward computer analysis of nucleotide sequences.

6. Further procedures for sequence analysis by computer.

7. The pitch of chromatin DNA is reflected in its nucleotide sequence.

8. A computer program to search for tRNA genes.

9. Sequence data handling by computer.

10. Human fetal G gamma- and A gamma-globin genes: complete nucleotide sequences suggest that DNA can be exchanged between these duplicated genes.

1. DNA sequence analysis: a procedure to find homologies among many sequences.

2. Portable microcomputer software for nucleotide sequence analysis.

3. Applications of parallel processing algorithms for DNA sequence analysis.

4. The diagonal-traverse homology search algorithm for locating similarities between two sequences.

5. An interactive graphics program for comparing and aligning nucleic acid and amino acid sequences.