Literature DB >> 3889848

A complex of single-strand binding protein and M13 DNA as hybridization probe.

A C Syvänen, M Alanen, H Söderlund.   

Abstract

Single-stranded DNA was complexed to the single-strand binding protein (SSB) of Escherichia coli in a mass ratio of 30:1. The protein moiety of this complex can be labelled by a number of methods of which we have chosen radio-iodination and biotinylation as examples. The SSB-M13 DNA complexes, labelled to high specific activities, were used as probes in hybridization experiments in which 1.6 X 10(-18) moles of immobilized target DNA were detected. The stability of the hybrids was not severely decreased by the binding of SSB. Analysis of hybrids by electron microscopy showed that complexing of DNA with SSB could be used to allow its subsequent identification in the hybrids.

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Year:  1985        PMID: 3889848      PMCID: PMC341194          DOI: 10.1093/nar/13.8.2789

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  22 in total

1.  Identification of specific crosslinked histones after treatment of chromatin with formaldehyde.

Authors:  F Van Lente; J F Jackson; H Weintraub
Journal:  Cell       Date:  1975-05       Impact factor: 41.582

2.  Time-resolved fluorometer for lanthanide chelates--a new generation of nonisotopic immunoassays.

Authors:  E Soini; H Kojola
Journal:  Clin Chem       Date:  1983-01       Impact factor: 8.327

3.  The making of strand-specific M13 probes.

Authors:  N Hu; J Messing
Journal:  Gene       Date:  1982-03       Impact factor: 3.688

Review 4.  Electron microscope visualization of chromatin and other DNA-protein complexes.

Authors:  J D Griffith; G Christiansen
Journal:  Annu Rev Biophys Bioeng       Date:  1978

5.  Determination of nucleic acid sequence homologies and relative concentrations by a dot hybridization procedure.

Authors:  F C Kafatos; C W Jones; A Efstratiadis
Journal:  Nucleic Acids Res       Date:  1979-11-24       Impact factor: 16.971

6.  Rapid and sensitive colorimetric method for visualizing biotin-labeled DNA probes hybridized to DNA or RNA immobilized on nitrocellulose: Bio-blots.

Authors:  J J Leary; D J Brigati; D C Ward
Journal:  Proc Natl Acad Sci U S A       Date:  1983-07       Impact factor: 11.205

7.  Enzymatic synthesis of biotin-labeled polynucleotides: novel nucleic acid affinity probes.

Authors:  P R Langer; A A Waldrop; D C Ward
Journal:  Proc Natl Acad Sci U S A       Date:  1981-11       Impact factor: 11.205

8.  Sequences of the ssb gene and protein.

Authors:  A Sancar; K R Williams; J W Chase; W D Rupp
Journal:  Proc Natl Acad Sci U S A       Date:  1981-07       Impact factor: 11.205

9.  Interaction of single-strand binding protein and RecA protein at the single-stranded DNA site.

Authors:  S P Cohen; J Resnick; R Sussman
Journal:  J Mol Biol       Date:  1983-07-15       Impact factor: 5.469

10.  Sandwich hybridization as a convenient method for the detection of nucleic acids in crude samples.

Authors:  M Ranki; A Palva; M Virtanen; M Laaksonen; H Söderlund
Journal:  Gene       Date:  1983 Jan-Feb       Impact factor: 3.688

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  8 in total

1.  Protein-DNA conjugates produced by UV irradiation and their use as probes for hybridization.

Authors:  J Czichos; M Köhler; B Reckmann; M Renz
Journal:  Nucleic Acids Res       Date:  1989-02-25       Impact factor: 16.971

2.  Detection of sub-picogram quantities of specific DNA sequences on blot hybridization with biotinylated probes.

Authors:  V T Chan; K A Fleming; J O McGee
Journal:  Nucleic Acids Res       Date:  1985-11-25       Impact factor: 16.971

3.  Fast quantification of nucleic acid hybrids by affinity-based hybrid collection.

Authors:  A C Syvänen; M Laaksonen; H Söderlund
Journal:  Nucleic Acids Res       Date:  1986-06-25       Impact factor: 16.971

4.  Time-resolved fluorometry: a sensitive method to quantify DNA-hybrids.

Authors:  A C Syvänen; P Tchen; M Ranki; H Söderlund
Journal:  Nucleic Acids Res       Date:  1986-01-24       Impact factor: 16.971

5.  Photocaged Quinone Methide Crosslinkers for Light-Controlled Chemical Crosslinking of Protein-Protein and Protein-DNA Complexes.

Authors:  Jun Liu; Lingchao Cai; Wei Sun; Rujin Cheng; Nanxi Wang; Ling Jin; Sharon Rozovsky; Ian B Seiple; Lei Wang
Journal:  Angew Chem Int Ed Engl       Date:  2019-11-08       Impact factor: 15.336

6.  Synthesis in vitro and application of biotinylated DNA probes for human papilloma virus type 16 by utilizing the polymerase chain reaction.

Authors:  P J Day; I S Bevan; S J Gurney; L S Young; M R Walker
Journal:  Biochem J       Date:  1990-04-01       Impact factor: 3.857

7.  Preparation of oligodeoxynucleotide-alkaline phosphatase conjugates and their use as hybridization probes.

Authors:  E Jablonski; E W Moomaw; R H Tullis; J L Ruth
Journal:  Nucleic Acids Res       Date:  1986-08-11       Impact factor: 16.971

8.  High-resolution AFM imaging of single-stranded DNA-binding (SSB) protein--DNA complexes.

Authors:  Loïc Hamon; David Pastré; Pauline Dupaigne; Cyrille Le Breton; Eric Le Cam; Olivier Piétrement
Journal:  Nucleic Acids Res       Date:  2007-03-28       Impact factor: 16.971

  8 in total

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